Return to main results Retrieve Phyre Job Id

Job DescriptionP64562
Confidence99.23%DateThu Jan 5 12:09:27 GMT 2012
Rank3Aligned Residues71
% Identity25%Templatec3t1bB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: crystal structure of the full-length aphb n100e variant
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70..
Predicted Secondary structure 


























Query SS confidence 






































































Query Sequence  HFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGIPRPLYALFAGRKGMPAIARYFMDELTTRL
Query Conservation 
      
   
 


 

       
  
 

 

           

 
        

 


 
    
Alig confidence 






































































Template Conservation          
  
 

  

            
               
              
   
    
Template Sequence  ALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYH
Template Known Secondary structure  STT

GGGTTSS

TT
B





SS

S
Template Predicted Secondary structure 






















Template SS confidence 






































































   219220.........230.........240.........250.........260.........270.........280.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions