Return to main results Retrieve Phyre Job Id

Job DescriptionP64562
Confidence99.35%DateThu Jan 5 12:09:27 GMT 2012
Rank1Aligned Residues72
% Identity22%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70...
Predicted Secondary structure 
















.









Query SS confidence 









































.





























Query Sequence  HFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGI. PRPLYALFAGRKGMPAIARYFMDELTTRLA
Query Conservation 
      
   
 


 

       
  
 

 

      .     

 
        

 


 
     
Alig confidence 









































.





























Template Conservation          
  
 
   
             
  
             

             
 
 
   

Template Sequence  SGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG
Template Known Secondary structure  STTS
BTSS
TTTB



GGGGG

.
Template Predicted Secondary structure 





























Template SS confidence 








































































   222.......230.........240.........250.........260.........270.........280.........290....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions