Job Description P64562 Confidence 11.28% Date Thu Jan 5 12:09:27 GMT 2012 Rank 39 Aligned Residues 70 % Identity 14% Template c2i7xA_ PDB info PDB header:rna binding protein, protein binding Chain: A: PDB Molecule:protein cft2; PDBTitle: structure of yeast cpsf-100 (ydh1p) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	Q	R	V	R	A	L	V	V	L	N	G	V	A	L	L	P	Q	F	A	C	K	Q	G	L	A	N	G	E	L	V	R	L	F	A	P	W	S	G	I	P	R	P	L	Y	A	L	F	A	G	R	K	G	M	P	A	I	A	R	Y	F	M	D	E	L	T	T	R	L	A	N
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		F	K	D	T	L	K	K	G	L	S	S	D	G	S	V	I	I	P	V	D	M	S	G	K	F	L	D	L	.	.	F	T	Q	V	H	E	L	L	F	E	S	Q	V	P	V	L	I	L	S	Y	A	R	G	R	T	L	T	Y	A	K	S	M	L	E	W	L	S	P	S	L	L	K
Template Known Secondary structure										T	S	T	T									T	T	T						.	.									T	T										T	T	T	T								T		G	G	G	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions