Job Description P64562 Confidence 98.28% Date Thu Jan 5 12:09:27 GMT 2012 Rank 29 Aligned Residues 69 % Identity 16% Template c2f78A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: benm effector binding domain with its effector benzoate Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	A	Q	R	V	R	A	L	V	V	L	N	G	V	A	L	L	P	Q	F	A	C	K	Q	G	L	A	N	G	E	L	V	R	L	F	A	P	W	S	G	I	P	R	P	L	Y	A	L	F	A	G	R	K	G	M	P	A	I	A	R	Y	F	M	D	E	L	T	T	R	L	A
Query Conservation
Alig confidence																																									.	.														.
Template Conservation																																									.	.														.
Template Sequence		E	V	Q	L	A	L	G	L	V	A	A	G	E	G	I	S	L	V	P	A	S	T	Q	S	I	Q	L	F	N	L	S	Y	V	P	L	L	D	P	D	.	.	A	I	T	P	I	Y	I	A	V	R	N	M	E	.	E	S	T	Y	I	Y	S	L	Y	E	T	I	R	Q	I	Y	A
Template Known Secondary structure		S											T	S		B					G	G	G	G	G				T	T						B			T	T	.	.											S	S		.
Template Predicted Secondary structure																																									.	.														.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions