 |
Job Description | P33346 | Confidence | 10.91% | Date | Thu Jan 5 11:51:48 GMT 2012 |
Rank | 58 | Aligned Residues | 54 |
% Identity | 13% | Template | d2f2ea1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| HxlR-like
|
Resolution | 1.85 |
|
  |   |
851 | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | K | S | A | R | A | V | S | G | L | N | I | L | T | L | M | N | N | D | M | A | L | I | Q | L | H | H | I | S | Q | R | A | K | S | R | P | L | R | D | N | A | A | E | F | L | Q | V | V | A | E | N | R | G | L | S | Q | E | E | L | A | D | R | L |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|
Template Sequence |   |
T | S | H | K | Q | A | S | C | P | V | A | R | P | L | D | V | I | G | D | G | W | S | X | L | I | V | R | D | A | F | E | G | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | F | G | E | F | Q | K | S | L | G | L | A | K | N | I | L | A | A | R | L |
Template Known Secondary structure |   |
|
| S | T | T |
| S |
| T | T | T | T | T |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|