Return to main results Retrieve Phyre Job Id

Job DescriptionP33346
Confidence22.42%DateThu Jan 5 11:51:48 GMT 2012
Rank13Aligned Residues39
% Identity18%Templatec2b0tA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadp isocitrate dehydrogenase; PDBTitle: structure of monomeric nadp isocitrate dehydrogenase
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   915....920.........930.........940.........950.....
Predicted Secondary structure 

























Query SS confidence 








































Query Sequence  VPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQ
Query Conservation 






  
   



 
 


 


 
 
 
 
  

 
Alig confidence 







..






























Template Conservation 
 





.. 











   


   


  
 

Template Sequence  VPNVGLMA. . QKAEEYGSHDKTFRIEADGVVQVVSSNGDVL
Template Known Secondary structure 



T..TT
GGGG
GGG

SS
TTS
Template Predicted Secondary structure 


..














Template SS confidence 








































   403......410 .........420.........430.........440.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions