Return to main results Retrieve Phyre Job Id

Job DescriptionP76216
Confidence8.70%DateThu Jan 5 12:20:40 GMT 2012
Rank72Aligned Residues98
% Identity14%Templatec3if2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   296...300......... 310.........320......... 330.........340.........350.........360 .........370..
Predicted Secondary structure 

.








.






.



Query SS confidence 













.



















.






























.











Query Sequence  VSDTVSTYLFNSQL. LSRDDGSMMLVLPQECREHA. GVWGYLNELLAADNPISELKVFDLRESMANG. GGPACLRLRVVL
Query Conservation 
 


 







.


 



 



 

 

 . 

  
  


 



      





 

.









 
Alig confidence 













.











..





.






























.











Template Conservation      
   
         
 

 

  .. 
             
   

 
 

  
               




  
Template Sequence  AVKLLKQALGDYPLXIHKPEGAIFLWL. . WFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRXSIAA
Template Known Secondary structure  SSSSS


BSS..TT
SS
TT
GGGS
TTS

TT
GGGGSS
S
Template Predicted Secondary structure 








..

































Template SS confidence 















































































   343......350.........360......... 370.........380.........390.........400.........410.........420
 
   373......380.........390.........400.....
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  TEEERRAVNPAVMMNDTLFNALNDWVDRYYRDR
Query Conservation 
  




   
 

  
 
 
  

 





Alig confidence 




..........

















Template Conservation    
 
..........  
  

   
       
Template Sequence  DEQTL. . . . . . . . . . IDGIKVIGEVVRELYDNK
Template Known Secondary structure 
..........

Template Predicted Secondary structure 
..........

Template SS confidence 
































   421.... ....430.........440...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions