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Job DescriptionP45524
Confidence98.91%DateThu Jan 5 12:02:54 GMT 2012
Rank238Aligned Residues287
% Identity11%Templated1ivya_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Serine carboxypeptidase-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.
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Query Sequence  FRRQVKFTPYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRG. . . . . . . . . . . . . . .
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Template Sequence  LAKQPSFRQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCS. . . . . . SLDGLLTEHGPFLVQPDGVTLEYNP
Template Known Secondary structure 
SS

SS

STT

SS
GGGS


TTTB
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TTSS

T
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   13......20.........30.........40.........50.........60. ........70.........80......
 
   102.......110 ......... 120.........130.........140.. .......150.........160..... ..
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Query Sequence  . . . . . . WLGVVMHFR. GCSGEPNRM. . HRIYHSGETEDASWFLRWLQREF. . . GHAPTAAVGYSLGGNMLACLLAK. . EG
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Template Sequence  YSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQD
Template Known Secondary structure  T
GGGSS

STTSTT
SS




BSGGGTTS
TTTT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   168.170.........180.........190.... .....200.........210.........220.........230.......
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Query Sequence  NDLPVDAAVIVSAPFMLEACSYHMEKG. FSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIRE. . . . . . . . .
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Template Sequence  PSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNI
Template Known Secondary structure  TTS
S

SBTTSS
TT

SS


SSS

T
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   238.240.........250.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FDDLITARIHGYAD
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Template Sequence  YNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNIPE
Template Known Secondary structure  T
TTS

TT

SSSTT


S
SSTTS





GGGT


TT


TSTT

T
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   247..250.........260.........270.........280.........290.........300.........310.........320......
 
   252.......260. ........270.........280.........290......
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Query Sequence  AIDYYRQCSA. . . . . . . . . . . . . . . . . MPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPP. . . . . . . . . . . . . . . . . .
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Template Sequence  QLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSG
Template Known Secondary structure  TS



SB

B


SBST

TT
SSS
T



TTS
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   327..330.........340.........350.........360.........370.........380.........390.........400......
 
   297..300.........310.........320.........330........
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Query Sequence  . . . . . . . . . . . QVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEAK
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Template Sequence  EQIAGFVKEFSHIAFLTIKGAGHMVPTDKP. . . . . . . . . LAAFTMFSRFLNKQ
Template Known Secondary structure  SSTT

SS
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   407..410.........420.........430...... ...440.........450
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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