Job Description P45524 Confidence 98.96% Date Thu Jan 5 12:02:54 GMT 2012 Rank 236 Aligned Residues 271 % Identity 15% Template c3n2zB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lysosomal pro-x carboxypeptidase; PDBTitle: the structure of human prolylcarboxypeptidase at 2.80 angstroms2 resolution Resolution 2.79 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		W	S	E	N	P	A	Q	A	Q	H	K	P	R	L	V	V	F	H	G	L	E	G	S	L	N	S	P	Y	A	H	.	.	G	L	V	E	A	A	Q	K	R	G	W	L	G	V	V	M	H	F	R	G	C	S	G	E	P	N	R	M	H	R	.	.	.	.	.	.	.	.	.	.	I	Y	H	S	G	E	T	E
Query Conservation																																.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	D	K	Y	W	K	K	N	G	G	S	I	L	F	Y	T	G	N	E	G	D	I	I	W	F	C	N	N	T	G	F	M	W	D	V	A	E	E	L	K	A	M	L	V	F	A	E	H	R	Y	Y	G	E	S	L	P	F	G	D	N	S	F	K	D	S	R	H	L	N	F	L	T	S	E	Q	A	L	A
Template Known Secondary structure						T	T			T	T	T										S	S																				T									T	T	S	T	T			T	T	G	G	G	G	G	S		T	T	T	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	S	W	F	L	R	W	L	Q	R	E	F	G	H	A	.	.	.	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.
Template Sequence		D	F	A	E	L	I	K	H	L	K	R	T	I	P	G	A	E	N	Q	P	V	I	A	I	G	G	S	Y	G	G	M	L	A	A	W	F	R	M	K	Y	P	H	.	.	M	V	V	G	A	L	A	A	S	A	P	I	W	Q	F	E	D	L	V	P	C	G	V	F	M	K	I	V	T	T	D	F	R	K	S	G
Template Known Secondary structure														S	T	T	G	G	G									T														T	T	.	.	T		S						T			T	T		S	T	T	S	S		T	T												T	T	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
			186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.																																																																														.	.
Query SS confidence		.																																																																														.	.
Query Sequence		.	A	C	S	Y	H	M	E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	.	.
Query Conservation		.																																																																														.	.
Alig confidence		.																																																																														.	.
Template Conservation
Template Sequence		P	H	C	S	E	S	I	H	R	S	W	D	A	I	N	R	L	S	N	T	G	S	G	L	Q	W	L	T	G	A	L	H	L	C	S	P	L	T	S	Q	D	I	Q	H	L	K	D	W	I	S	E	T	W	V	N	L	A	M	V	D	Y	P	Y	A	S	N	F	L	Q	P	L	P	A	W	P	I	K	V	V	C
Template Known Secondary structure		T	T																T	T	S											T	T	B	S	S				T	T	S																		T			S	S				S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	L	K	N	P	N	V	S	D	S	L	L	L	Q	N	I	F	Q	A	L	N	V	Y	Y	N	Y	S	G	Q	V	K	C	L	N	I	S	E	S	L	G	T	L	G	W	S	Y	Q	A	C	T	E	V	V	M	P	F	C	T	N	G	V	D	D	M	F	E	P	H	S	W	N	L	K	E	L	S	D	D	C
Template Known Secondary structure				S				S																				T	T	S			S	S	B																		T							B		S	S	S	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
																263	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	L	N	R	I	A	K	P	.	.	.	.	T	L	I	I	H	A	K	D	D	P	F	M	D	H	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																			.	.	.																												.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		F	Q	Q	W	G	V	R	P	R	P	S	W	I	T	T	M	Y	G	G	K	N	I	S	S	H	T	N	I	V	F	S	N	G	E	L	D	P	W	S	G	G	G	V	T	K	.	.	.	D	I	T	D	T	L	V	A	V	T	I	S	E	G	A	H	H	L	D	L	R	T	K	N	A	L	D	P	M	S	V	L
Template Known Secondary structure						S					T	T								T	T			T	T										S	S		G	G	G	G	G	S			S	.	.	.		S	S	S	S							T	T			S	S	G	G	G	S				S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.				440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y	L	E	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	A	R	S	L	E	V	R	H	M	K	N	W	I	R	D	F	Y	D	S
Template Known Secondary structure																				T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions