Job Description P45524 Confidence 99.95% Date Thu Jan 5 12:02:54 GMT 2012 Rank 43 Aligned Residues 277 % Identity 13% Template c3kdaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	F	T	P	Y	W	Q	R	L	E	L	P	D	G	D	F	V	D	L	A	W	S	E	N	P	A	Q	A	Q	H	K	P	R	L	V	V	F	H	G	L	E	G	S	L	N	S	P	Y	A	H	G	L	V	E	A	A	Q	K	R	G	W	L	G	V	V	M	H	F	R	G	C	S	G	E	P	N	R	M	H
Query Conservation
Alig confidence																	.	.										.	.	.	.																			.	.								.
Template Conservation																	.	.										.	.	.	.																			.	.								.
Template Sequence		P	V	P	N	G	F	E	S	A	Y	R	E	V	D	G	.	.	V	K	L	H	Y	V	K	G	G	.	.	.	.	Q	G	P	L	V	M	L	V	H	G	F	G	Q	T	W	Y	E	W	.	.	H	Q	L	M	P	E	L	.	A	K	R	F	T	V	I	A	P	D	L	P	G	L	G	Q	S	E	P	P	K	T
Template Known Secondary structure					T	T									T	T	.	.										.	.	.	.		S	S								T	T			G	G	G	G	.	.	T	T						.	T	T	T	S								T	T	S	T	T					S	S
Template Predicted Secondary structure																	.	.										.	.	.	.																			.	.								.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.														.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	C
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		G	Y	S	G	E	Q	V	A	V	Y	L	H	K	L	A	R	Q	F	.	.	.	S	P	D	R	P	F	D	L	V	A	H	D	I	G	I	W	N	T	Y	P	M	V	V	K	N	Q	A	D	I	A	R	L	V	Y	M	E	A	P	I	P	D	A	R	I	Y	R	F	P	A	F	T	A	Q	G	E	S	L	V	W
Template Known Secondary structure			S	S																.	.	.	S	S	S	S								T					T	T							T	G	G	G								S	S			S	S	G	G	G	G	G	S		S			T	T				S	S	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	H	M	E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	P	M	L	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	S	F	F	A	A	D	D	R	L	A	E	T	L	I	A	G	K	E	R	F	F	L	E	H	F	I	K	S	H	A	S	N	T	E	V	F	S	E	R	L	L	D	L	Y	A	R	S	Y	A	K	P	H	S	L	N	A	S	F	E	Y	Y	R	A	L	N	E	S	V	R	Q	N	A	E	L	A	K	T	R
Template Known Secondary structure									S	T	T							T	T													T		S	S	G	G	G	S													T	S													T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	P	T	L	I	I	H	A	K	D	D	P	F	M	D	H	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		L	Q	M	P	T	M	T	L	A	G	G	G	A	G	G	M	G	T	F	Q	L	E	Q	M	K	A	Y	A	E	D	V	E	G	H	V	L	P	G	C	G	H	W	L	P	E	E	C	A	A	P	.	.	.	.	.	M	N	R	L	V	I	D	F	L	S	R	G
Template Known Secondary structure		B		S									S	T	T			T	T								T	T	B	S	S							T	T			S						S				.	.	.	.	.										T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions