|   |
44 | . | . | . | . | . | 50 | . | . | . | . | |
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
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|
. | . | . | . | . | . | . | . | 110 | . | |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |
|
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|
| . | . | . |
|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|  |  | . |
Query SS confidence |   |
|
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|
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|
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|
| . |
|
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| . |
. |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
|
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|
| . |
Query Sequence |   |
T | P | Y | W | Q | R | L | E | L | P | D | . |
G | D | F | V | D | L | A | W | S | E | N | P | A | Q | A | Q | H | K | . |
. |
. |
P | R | L | V | V | F | H | G | L | E | G | S | L | N | S | P | Y | A | H | G | L | V | E | A | A | Q | K | R | G | . |
. |
. |
. |
. |
. |
. |
W | L | G | V | V | M | H | F | R | G | . |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
| . |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
|   |
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|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |
|
| . |
Alig confidence |   |
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| . |
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| . | . | . |
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| . | . | . | . |
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| . | . | . | . | . | . | . |
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| . |
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |
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|   |
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|
| . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
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|   |   |   |   |
|
Template Sequence |   |
E | Y | Q | S | K | R | L | E | S | R | L | L | K | E | T | R | E | Y | V | I | A | L | P | E | G | Y | A | Q | S | L | E | A | Y | P | V | V | Y | L | L | D | G | . |
. |
. |
. |
E | D | Q | F | D | H | X | A | S | L | L | Q | F | L | S | Q | G | T | X | P | Q | I | P | K | V | I | I | V | G | I | H | N | T | N | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
|
| T | T | G | G | G | S |
|
|
|  |  |  |  |  |  | S | S |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S | S |
| S | S |
|
|
|  |  |  |  |  |
|
| S | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
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|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
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112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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Query Sequence |   |
. |
. |
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. |
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. |
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. |
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. |
. |
. |
C | S | G | E | P | N | R | M | H | R | I | Y | H | S | G | E | T | E | D | A | S | W | F | L | R | W | L | Q | R | E | F | G | . |
H | A | P | T | A | A | V | G | Y | S | L | G | G | N | M | L | A | C | L | L | A | K | E | G | N | D | L | P | V | D | A |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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| . |
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|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
X | R | D | Y | T | P | T | H | T | L | V | L | P | S | G | N | K | G | N | P | Q | Y | Q | H | T | G | G | A | G | R | F | L | D | F | I | E | K | E | L | A | P | S | I | E | S | Q | L | R | T | N | G | I | N | V | L | V | G | H | S | F | G | G | L | V | A | X | E | A | L | R | T | D | R | P | L | F | S | A | Y | L |
Template Known Secondary structure |   |
 |  |  | S |
| S | S |
|
| S | B |
| T | T | S | S | B |
|
| G | G | G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
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|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
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|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | I | V | S | A | P | F | M | L | E | A | C | S | Y | H | M | E | K | G | F | S | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | D | T | S | L | W | F | D | S | P | H | Y | L | T | L | L | E | E | R | V | V | K |
Template Known Secondary structure |   |
 |  | S |
|
| T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |