Job Description P45524 Confidence 99.83% Date Thu Jan 5 12:02:54 GMT 2012 Rank 142 Aligned Residues 264 % Identity 15% Template c3ed1E_ PDB info PDB header:hydrolase receptor Chain: E: PDB Molecule:gibberellin receptor gid1; PDBTitle: crystal structure of rice gid1 complexed with ga3 Resolution 1.90 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																			.													.	.	.																				.
Query SS confidence																																			.													.	.	.																				.
Query Sequence		R	R	Q	V	K	F	T	P	Y	W	Q	R	L	E	L	P	D	G	D	F	V	D	L	A	W	S	E	N	P	A	Q	A	Q	.	H	K	P	R	L	V	V	F	H	G	L	E	.	.	.	G	S	L	N	S	P	Y	A	H	G	L	V	E	A	A	Q	K	R	G	.	W	L	G	V	V	M	H	F	R	G	C
Query Conservation																																			.													.	.	.																				.
Alig confidence																																			.													.	.	.																				.
Template Conservation
Template Sequence		N	A	R	P	L	E	G	V	S	S	F	D	H	I	I	D	Q	S	V	G	L	E	V	R	I	Y	R	A	D	A	P	A	A	E	P	F	P	V	I	I	F	F	H	G	G	S	F	V	H	S	S	A	S	S	T	I	Y	D	S	L	C	R	R	F	V	K	L	S	K	G	V	V	V	S	V	N	Y	R	R	A
Template Known Secondary structure			S	S		B	T	T	B									T	T	T	T													S	S											S	T	T	T	S			T	T	B															T	S										T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		S	G	E	P	N	R	M	H	R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	.	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	C	S	Y	H	M
Query Conservation																																																										.
Alig confidence										.	.	.																																														.
Template Conservation										.	.	.
Template Sequence		P	E	H	R	Y	P	C	A	.	.	.	Y	D	D	G	W	T	A	L	K	W	V	M	S	Q	P	F	M	R	S	A	Q	A	R	V	F	L	S	G	D	S	S	G	G	N	I	A	H	H	V	A	V	R	A	A	D	E	G	V	K	V	C	G	N	I	L	L	N	A	M	F	G	G	T	E	R	T	E	S	E
Template Known Secondary structure		T	T	S		T	T			.	.	.													T		T	T	T	B				B																								T	T				S												S	S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	P	M	L	N	R	I	A	K	P
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	L	D	G	K	Y	F	V	T	L	Q	D	R	D	W	Y	W	K	A	Y	L	P	E	D	A	D	R	D	H	P	A	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	G	P	N	G	R	R	L	G	G	L	P	F	A	K
Template Known Secondary structure					T	T	T	S	S														S		T	T			T	T	S	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T					T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																															.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		T	L	I	I	H	A	K	D	D	P	F	M	D	.	.	H	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y	L
Query Conservation															.	.
Alig confidence															.	.																									.
Template Conservation																																									.
Template Sequence		S	L	I	I	V	S	G	L	D	L	T	C	D	R	Q	L	A	Y	A	D	A	L	R	E	D	G	H	H	V	K	V	V	Q	C	E	N	A	T	V	.	G	F	Y	L	L	P	N	T	V	H	Y	H	E	V	M	E	E	I	S	D	F	L	N	A	N	L
Template Known Secondary structure								T	T	S	T	T														T	T									T	T			T	.	T	G	G	G	S	S		S																	T
Template Predicted Secondary structure																																									.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions