Return to main results Retrieve Phyre Job Id

Job DescriptionP45524
Confidence42.79%DateThu Jan 5 12:02:54 GMT 2012
Rank379Aligned Residues36
% Identity19%Templatec3e5nA_
PDB info PDB header:ligaseChain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90 .........100........
Predicted Secondary structure 











.....




Query SS confidence 



















. . . . .

















Query Sequence  HKPRLVVFHGLEGSLNSPYA. . . . . HGLVEAAQKRGWLGVVMH
Query Conservation    
 





  
       .....  
   
   
  

  
Alig confidence 









..







.....

















Template Conservation   
 

 

 
..
 
 
  

  

  
  

   
  
  
 
Template Sequence  RKIRVGLIFG. . GKSAEHEVSLQSARNILDALDPQRFEPVLIG
Template Known Secondary structure 

..
SSTTS
TTT
Template Predicted Secondary structure 




..





Template SS confidence 










































   2.......10. ........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions