Job Description P45524 Confidence 99.76% Date Thu Jan 5 12:02:54 GMT 2012 Rank 157 Aligned Residues 250 % Identity 14% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																			.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																			.
Query Sequence		Y	W	Q	R	L	E	L	P	D	G	D	F	V	D	L	A	W	S	E	N	P	A	Q	A	Q	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	L	V	V	F	H	G	L	E	.	.	.	G	S	L	N	S	P	Y	A	H	G	L	V	E	A	A	Q	K	R	.	G	W	L	G	V
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																			.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																			.
Template Conservation
Template Sequence		F	S	F	D	V	L	I	D	R	R	I	N	L	L	S	R	V	Y	R	P	A	Y	A	D	Q	E	Q	P	P	S	I	L	D	L	E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V
Template Known Secondary structure										T	T	T	T											T	T		S	S				T	T	S	T	T					S	S	S										S	T	T	T	S			T	T	B															T	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.																												.
Query SS confidence																																						.	.	.	.	.	.	.																												.
Query Sequence		V	M	H	F	R	G	C	S	G	E	P	N	R	M	H	R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	.	.	.	.	.	.	.	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	.	D	L	P	V	D	A	A	V	I
Query Conservation																																						.	.	.	.	.	.	.																												.
Alig confidence															.	.	.	.	.	.	.																	.	.	.	.	.	.	.																												.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		S	V	N	Y	R	R	A	P	E	N	P	Y	P	.	.	.	.	.	.	.	C	A	Y	D	D	G	W	I	A	L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V	L	G	N	I	L
Template Known Secondary structure								T	T	T	S		T	T	.	.	.	.	.	.	.															T		G	G	G			T	T	T	S	S									T															T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	P	F	M	L	E	A	C	S	Y	H	M	E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	P	M	F	G	G	N	E	R	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F
Template Known Secondary structure			S						S	S									T	T	T	S	S														S		T	T			T	T	S	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																															.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		Q	C	S	A	M	P	M	L	N	R	I	A	K	P	T	L	I	I	H	A	K	D	D	P	F	M	D	.	.	H	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T
Query Conservation																													.	.
Alig confidence																													.	.																									.
Template Conservation																																																							.
Template Sequence		S	P	R	G	K	S	L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L	I	R	D	W	Q	L	A	Y	A	E	G	L	K	K	A	G	Q	E	V	K	L	M	H	L	E	K	A	T	V	.	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V	N	A
Template Known Secondary structure		S	T	T	S				T	T												T	T	S	T	T														T	T									T	T			T	.	T	T	T	S	S	S		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions