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Job DescriptionP45524
Confidence99.94%DateThu Jan 5 12:02:54 GMT 2012
Rank63Aligned Residues279
% Identity11%Templatec2yysA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:proline iminopeptidase-related protein; PDBTitle: crystal structure of the proline iminopeptidase-related protein2 ttha1809 from thermus thermophilus hb8
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  FTPYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRI
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Template Sequence  MREEIGYVPV. GEAELYVEDV. . . . GPVEGPALFVLHGGPGGNAYV. . LREGLQDYLEGFRVVYFDQRGSGRSLELPQDP
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G
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   1........10 .........20 .........30.........40. ........50.........60.........70...
 
   123......130.........140.........150.........160.........170.........180.........190.........200..
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Query Sequence  YHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRY
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Template Sequence  RLF. TVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAE. GAILLAPWVNFPWLAARLAEAAGLAPLPDPE
Template Known Secondary structure  GG
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   74.. ...80.........90.........100.........110.........120 .........130.........140.........150.
 
   203......210.........220.........230.........240.........250.........260.........270.........280..
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Query Sequence  LLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPF
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Template Sequence  ENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGT
Template Known Secondary structure  S

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STTGGG
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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   283......290.........300.........310.........320.........330.......
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Query Sequence  MDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEA
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Template Sequence  SYPYAEEVASR. . LRAPIRVLPEAGHYLWIDAPEA. . . . . FEEAFKEALAALVPA
Template Known Secondary structure  TTTT..T

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   232.......240.. .......250.........260.... .....270.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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