Return to main results Retrieve Phyre Job Id

Job DescriptionP45524
Confidence43.36%DateThu Jan 5 12:02:54 GMT 2012
Rank377Aligned Residues44
% Identity25%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.......
Predicted Secondary structure 






















Query SS confidence 











































Query Sequence  ENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVM
Query Conservation           
 





  
         
   
   
  

  
Alig confidence 











































Template Conservation          

 






 
 




 



    
 
 

 

Template Sequence  GVKAWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLI
Template Known Secondary structure 







SS
STTSSTT

Template Predicted Secondary structure 



















Template SS confidence 











































   90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions