Job Description P45524 Confidence 99.94% Date Thu Jan 5 12:02:54 GMT 2012 Rank 61 Aligned Residues 237 % Identity 19% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure														.																			.	.																.	.	.	.	.	.
Query SS confidence														.																			.	.																.	.	.	.	.	.
Query Sequence		F	T	P	Y	W	Q	R	L	E	L	P	D	.	G	D	F	V	D	L	A	W	S	E	N	P	A	Q	A	Q	H	K	.	.	P	R	L	V	V	F	H	G	L	E	G	S	L	N	S	.	.	.	.	.	.	P	Y	A	H	G	L	V	E	A	A	Q	K	R	G	W	L	G	V	V	M	H	F	R	G	C	S
Query Conservation														.																			.	.																.	.	.	.	.	.
Alig confidence														.																			.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	V	E	F	G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q	Y	L	A	Q	Q	G	Y	V	V	F	S	L	D	N	R	G	T	P
Template Known Secondary structure												T	T	S	S											S	S			T	T	S											S	T	T			S		S	S					S												T	T									T	T		S
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		114	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																									.	.
Query SS confidence						.	.	.	.																									.	.
Query Sequence		G	E	P	N	.	.	.	.	R	M	H	R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	.	.	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	C
Query Conservation						.	.	.	.																									.	.
Alig confidence						.	.	.	.																									.	.																												.	.
Template Conservation																																																															.	.
Template Sequence		R	R	G	R	D	F	G	G	A	L	Y	G	K	Q	G	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	P	W	V	D	P	A	R	I	G	V	Q	G	W	S	N	G	G	Y	M	T	L	M	L	L	A	K	A	S	D	.	.	S	Y	A	C	G	V	A	G	A	P	V	T	D	W	G	L	Y
Template Known Secondary structure		S	S							T	T	T	T		T	T	T															T	S	T	T												T														T	T	.	.	T		S						S					G	G	G	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.			.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	H	M	E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	P	M	L	N	R
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	H	Y	T	E	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H	I	E	G
Template Known Secondary structure		B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	G	G	G									S	G	G	G	G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		643	.	.	.	.	.	.	650																																																			.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		I	A	K	P	T	L	I	I	H	A	K	D	D	P	F	M	D	H	.	.	.	.	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y	L	E
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																								.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		L	R	S	P	L	L	L	I	H	G	M	A	D	D	N	V	L	F	T	N	S	T	S	L	M	S	A	L	Q	K	R	G	Q	P	F	E	L	M	T	Y	P	G	A	K	H	.	.	.	.	.	G	L	S	G	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L	K
Template Known Secondary structure				S								T	T		S	S	S		T													T	T									T	T			S	.	.	.	.	.	S
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.						.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions