Job Description P45524 Confidence 99.86% Date Thu Jan 5 12:02:54 GMT 2012 Rank 132 Aligned Residues 227 % Identity 17% Template c1xfdD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:dipeptidyl aminopeptidase-like protein 6; PDBTitle: structure of a human a-type potassium channel accelerating factor2 dppx, a member of the dipeptidyl aminopeptidase family Resolution 3.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.
Predicted Secondary structure																					.	.													.	.	.																																	.	.	.	.
Query SS confidence																					.	.													.	.	.																																	.	.	.	.
Query Sequence		D	G	D	F	V	D	L	A	W	S	E	N	P	A	Q	A	Q	H	K	.	.	P	R	L	V	V	F	H	G	L	E	G	S	.	.	.	L	N	S	P	Y	A	H	G	L	V	E	A	A	Q	K	R	G	W	L	G	V	V	M	H	F	R	G	C	S	G	E	P	.	.	.	.	N	R	M	H	R	I	Y	H
Query Conservation																					.	.													.	.	.																																	.	.	.	.
Alig confidence																					.	.													.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		D	D	Y	N	L	P	M	Q	I	L	K	P	A	T	F	T	D	T	T	H	Y	P	L	L	L	V	V	D	G	T	P	G	S	Q	S	V	A	E	K	F	E	V	S	W	E	T	V	M	V	S	S	H	G	A	V	V	V	K	C	D	G	R	G	S	G	F	Q	G	T	K	L	L	H	E	V	R	R	R	L	G
Template Known Secondary structure		T	T						B			B		S	S			S	S	S												T	T											S								T	T										T	T		S	S	S							T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																									.	.	.	.
Query SS confidence																			.	.																									.	.	.	.
Query Sequence		S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	.	.	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	.	.	.	.	E	G	N	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	C	S	Y	H	M	E	K	G	F	S	R	V
Query Conservation																			.	.																									.	.	.	.
Alig confidence																			.	.																									.	.	.	.				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	E	E	K	D	Q	M	E	A	V	R	T	M	L	K	E	Q	Y	I	D	R	T	R	V	A	V	F	G	K	D	Y	G	G	Y	L	S	T	Y	I	L	P	A	K	G	E	N	Q	G	Q	.	.	T	F	T	C	G	S	A	L	S	P	I	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T															S	S	S	S												T													S	S	S	T	T			.	.			S						S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.			.	.	.	.	.	.	.	.	740	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q	L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	P	M	L	N	R	I	A	.	K	P	T	L	I	I	H	A
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	L	Y	A	S	A	F	S	E	R	Y	L	G	L	H	G	L	D	N	R	A	Y	E	M	T	K	V	A	H	R	V	S	A	L	E	E	Q	Q	F	L	I	I	H	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	B												S	S			S	S	T	T	T	S		T					T	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		K	D	D	P	F	M	D	H	Q	V	.	.	.	.	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H	V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y	L	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																						.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		T	A	D	E	K	I	H	F	Q	H	T	A	E	L	I	T	Q	L	I	R	G	K	A	N	Y	S	L	Q	I	Y	P	D	E	S	H	.	.	.	.	Y	F	T	S	S	S	L	K	Q	H	L	Y	R	S	I	I	N	F	F	V	E	C	F	R
Template Known Secondary structure		T	T		S	S	S															T	T									T	T			S	.	.	.	.	S																			T	T	T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.					.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions