Job Description P45524 Confidence 99.93% Date Thu Jan 5 12:02:54 GMT 2012 Rank 85 Aligned Residues 253 % Identity 11% Template c1wprA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sigma factor sigb regulation protein rsbq; PDBTitle: crystal structure of rsbq inhibited by pmsf Resolution 2.60 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	H	K	P	R	L	V	V	F	H	G	L	E	G	S	L	N	S	P	Y	A	H	G	L	V	E	A	A	Q	K	R	G	W	L	G	V	V	M	H	F	R	G	C	S	G	E	P	N	R	M	H	R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	E	F	G	H	A	P	T	A
Query Conservation
Alig confidence																						.	.										.																									.	.
Template Conservation																						.	.										.																									.	.
Template Sequence		G	S	G	K	A	S	I	M	F	A	P	G	F	G	C	D	Q	S	V	W	.	.	N	A	V	A	P	A	F	E	E	.	D	H	R	V	I	L	F	D	Y	V	G	S	G	H	S	D	L	Y	D	L	N	R	Y	Q	.	.	T	L	D	G	Y	A	Q	D	V	L	D	V	C	E	A	L	D	L	K	E	T	V
Template Known Secondary structure					S	S								T	T			G	G	G	G	.	.	T	T	T	G	G	G	G	T	T	.	T	S								T	T	T	S	S	S					T	G	G	G	S	.	.	S															T	T		S
Template Predicted Secondary structure																						.	.										.																									.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A	K	E	G	N	D	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	C	S	Y	H	M	E	K	G	F	S	R	V	Y	Q	R	Y	L	L	N	L	L	K	A	N	A	A	R	K	L	A	A	Y	P	G	T	L	P	I	N	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	G	H	S	V	G	A	L	I	G	M	L	A	S	I	R	R	P	E	L	F	S	H	L	V	M	V	G	P	S	P	C	Y	L	N	D	P	P	E	Y	Y	G	G	F	E	E	E	Q	L	L	G	L	L	E	M	M	E	K	N	Y	I	G	W	A	T	V	F	A	A	T	V	L	N	Q	P	D	R	P	E
Template Known Secondary structure						T														G	G	G								S			S	B		B			T	T	T				S	B															T																T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	V	R	R	I	R	E	F	D	D	L	I	T	A	R	I	H	G	Y	A	D	A	I	D	Y	Y	R	Q	C	S	A	M	P	M	L	N	R	I	A	K	P	T	L	I	I	H	A	K	D	D	P	F	M	D	H	Q	V	I	P	K	P	E	S	L	P	P	Q	V	E	Y	Q	L	T	E	H	G	G	H
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		I	K	E	.	.	.	.	E	L	E	S	R	F	C	S	T	D	P	V	I	A	R	Q	F	A	K	A	A	F	F	S	D	H	R	E	D	L	S	K	V	T	V	P	S	L	I	L	Q	C	A	D	D	I	I	A	P	A	T	V	G	K	Y	M	H	Q	H	L	P	Y	S	S	L	K	Q	M	E	A	R	G	H
Template Known Secondary structure					.	.	.	.								T	S														T		B						T	T			S									S		S	S	S												S	S	S										S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		172	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	F	I	G	G	T	L	L	H	P	Q	M	W	L	E	S	R	I	P	D	W	L	T	T	Y	L
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		C	P	H	M	S	H	P	D	E	.	.	.	.	.	T	I	Q	L	I	G	D	Y	L	K	A	H	V
Template Known Secondary structure											.	.	.	.	.												T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions