Job Description P45524 Confidence 87.96% Date Thu Jan 5 12:02:54 GMT 2012 Rank 294 Aligned Residues 152 % Identity 17% Template c1gxsC_ PDB info PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme Resolution 2.3 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.
Predicted Secondary structure																																	.	.	.																											.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																											.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	R	Q	V	K	F	T	P	Y	W	Q	R	L	E	L	P	D	G	D	F	V	D	L	A	W	S	E	N	P	A	.	.	.	Q	A	Q	H	K	P	R	L	V	V	F	H	G	L	E	G	S	L	N	S	P	Y	A	H	G	L	.	V	E	A	A	Q	K	R	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.																											.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.																			.	.	.	.	.	.			.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		Q	P	N	G	V	A	F	G	M	Y	G	G	Y	V	T	I	D	D	N	N	G	R	A	L	Y	Y	W	F	Q	E	A	D	T	A	D	P	A	A	A	P	L	V	L	W	L	N	G	G	P	G	C	S	.	.	.	.	.	.	S	I	G	L	G	A	M	Q	E	L	G	A	F	R	V	H	T	N	G	E	S	L
Template Known Secondary structure				T	T			S											T	T	T	T												S	S		G	G	G	S									T	T	T			.	.	.	.	.	.	T	T	T	T					T	S	S	S					T	T	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
												102	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	W	L	G	V	V	M	H	F	R	.	G	C	S	G	E	P	N	R	M	H	R	I	Y	H	S	G	E	T	E	D	A	S	W	F	L	R	W	L	Q	R	.	.	.	.	.	.	E	F	G	H	A	P	T	A	A	V	G	Y	S	L	G	G	N	M	L	A	C	L	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.										.																															.	.	.	.	.	.														.
Template Conservation																																																																							.
Template Sequence		L	L	N	E	Y	A	W	N	K	A	A	N	I	L	F	A	E	S	P	A	G	V	G	F	S	Y	S	N	T	S	S	D	L	S	M	G	D	D	K	M	A	Q	D	T	Y	T	F	L	V	K	W	F	E	R	F	P	H	Y	N	Y	R	E	F	Y	I	A	G	E	S	.	G	H	F	I	P	Q	L	S	Q	V
Template Known Secondary structure					T	T		G	G	G	T	S								S	T	T	S	T	T				S	S	G	G	G	G																						S	G	G	G	T	T								S		.	T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.
		165	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		K	E	G	N	D	.	.	.	.	.	L	P	V	D	A	A	V	I	V	S	A	P	F	M	L	E	A	C	S	Y	H	M	E	K	G	F
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		V	Y	R	N	R	N	N	S	P	F	I	N	F	Q	G	L	L	V	S	S	G	L	T	N	D	H	E	D	M	I	G	M	F	E	S	W
Template Known Secondary structure					T	T	T	T	S	T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions