Job Description P76344 Confidence 100.00% Date Thu Jan 5 12:22:06 GMT 2012 Rank 2 Aligned Residues 188 % Identity 100% Template d1txla_ SCOP info Lipocalins Lipocalins Hypothetical protein YodA Resolution 1.70

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	K	P	L	T	E	V	E	Q	K	A	A	N	G	V	F	D	D	A	N	V	Q	N	R	T	L	S	D	W	D	G	V	W	Q	S	V	Y	P	L	L	Q	S	G	K	L	D	P	V	F	Q	K	K	A	D	A	D	K	T	K	T	F	A	E	I	K	D	Y	Y	H	K	G	Y	A	T	D	I	E	M	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	K	P	L	T	E	V	E	Q	K	A	A	N	G	V	F	D	D	A	N	V	Q	N	R	T	L	S	D	W	D	G	V	W	Q	S	V	Y	P	L	L	Q	S	G	K	L	D	P	V	F	Q	K	K	A	D	A	D	K	T	K	T	F	A	E	I	K	D	Y	Y	H	K	G	Y	A	T	D	I	E	M	I
Template Known Secondary structure															T	T				G	G	G						G	G	G	G							S							T	T	T												T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	D	G	I	V	E	F	H	R	N	N	E	T	T	S	C	K	Y	D	Y	D	G	Y	K	I	L	T	Y	K	S	G	K	K	G	V	R	Y	L	F	E	C	K	D	P	E	S	K	A	P	K	Y	I	Q	F	S	D	H	I	I	A	P	R	K	S	S	H	F	H	I	F	M	G	N	D	S	Q	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	E	D	G	I	V	E	F	H	R	N	N	E	T	T	S	C	K	Y	D	Y	D	G	Y	K	I	L	T	Y	K	S	G	K	K	G	V	R	Y	L	F	E	C	K	D	P	E	S	K	A	P	K	Y	I	Q	F	S	D	H	I	I	A	P	R	K	S	S	H	F	H	I	F	M	G	N	D	S	Q	Q	S
Template Known Secondary structure					T	T							T	T																		T	T	S													T	T			S		S							S			S	S				S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	E	M	E	N	W	P	T	Y	Y	P	Y	Q	L	S	S	E	E	V	V	E	E	M	M	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	N	E	M	E	N	W	P	T	Y	Y	P	Y	Q	L	S	S	E	E	V	V	E	E	M	M	S	H
Template Known Secondary structure				T			S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions