Job Description P0AAV8 Confidence 90.17% Date Thu Jan 5 11:13:57 GMT 2012 Rank 22 Aligned Residues 126 % Identity 16% Template d2gkea2 SCOP info Diaminopimelate epimerase-like Diaminopimelate epimerase-like Diaminopimelate epimerase Resolution 1.35

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		D	D	V	P	V	T	C	I	D	M	A	M	P	V	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	L	D	A	D	K	A	L	L	A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V	S	N	M	V	I	P	K	.	.	.	P	V	L	I	S	P	A	Q	K	G	G
Query Conservation																																																																				.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.								.	.	.											.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		Q	T	V	L	C	G	A	V	S	M	G	N	P	H	C	V	V	Q	V	D	D	I	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	A	N	V	E	Q	L	G	P	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	S	H	E	R	F	P	E	R	V	N	A	G	F	M	Q	I	I	N	K	E	.
Template Known Secondary structure											S	S	S								S		T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	T		T	T		T	T												T	T	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.													.	.	170	.	.	.	.	.	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	V	R	Y	F	M	P	H	S	C	H	R	A	L	A	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q	I	V	P	S	V	G	Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S	N	E	G	Q	D	A	T	T	L	R	A	S	V	I	R	T	T	R	K
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		H	I	K	L	R	V	Y	E	R	G	A	G	E	T	Q	A	C	G	S	G	A	C	A	A	V	A	V	G	I	M	Q	G	L	L	N	N	N	.	.	.	.	.	.	.	.	.	V	Q	V	D	L	P	G	G	S	L	M	I	E	W	N	G	V	G	H	P	.	.	.	.	.	L	Y	M	T	G	E	A	T	H
Template Known Secondary structure										T	T	T				S																T	T	S	S		S		.	.	.	.	.	.	.	.	.						T	T										T	T	S		.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.										.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.
		342	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	S	G	E	V	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	D	G	F	I	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions