Job Description P0AAV8 Confidence 97.26% Date Thu Jan 5 11:13:57 GMT 2012 Rank 11 Aligned Residues 101 % Identity 18% Template d1xuba1 SCOP info Diaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like Resolution 1.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		194	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		M	A	M	P	V	.	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	L	D	A	D	K	A	L	L	A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V	S	N	M	V	I	P	K	P	V	L	I	S	P	A	Q	K	G	G	A	I	N	V	R	Y	F	M	P	H	S
Query Conservation							.
Alig confidence							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		E	G	N	P	V	A	V	F	F	D	A	D	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	Q	M	Q	R	I	A	R	E	M	N	L	.	.	.	.	.	.	.	.	S	E	S	T	F	V	L	K	P	R	N	G	G	D	A	L	I	R	I	F	T	P	V	N
Template Known Secondary structure		S	S								S	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	.	.	.	.	.	.	.	.	S									S	S	S	S	S								S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30																					.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	R	A	L	A	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q	I	V	P	S	V	G	Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S	N	E	G	Q	D	A	T	T	L	R	A
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	E	L	P	F	A	G	A	P	L	L	G	T	A	I	A	L	.	.	.	.	.	.	.	.	.	.	G	A	H	T	D	N	H	R	L	Y	L	E	T	Q	M	G	T	I	A	F	E	L	E	R	Q	N	G	S	V	I	A	A	S	M
Template Known Secondary structure		.			S														.	.	.	.	.	.	.	.	.	.		T	T				S							T	T											T	T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions