 |
Job Description | P0AAV8 | Confidence | 16.73% | Date | Thu Jan 5 11:13:57 GMT 2012 |
Rank | 40 | Aligned Residues | 28 |
% Identity | 46% | Template | d1w5sa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Helicase DNA-binding domain
|
Resolution | 2.4 |
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | G | A | F | L | L | A | E | H | L | P | E | D | Q | . |
. |
T | Q | R | D | K | I | L | M | A | I | M | G | S |
Query Conservation |   |
|
|
|
|
|
|   |   |   |
|
|
|   |
|   | . | . |   |   |   |   |   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | T | T | L | F | R | L | A | P | H | L | P | A | D | R | L | I | E | V | V | D | N | I | I | Q | A | K | M | A | S |
Template Known Secondary structure |   |
|
|
|  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|