Job Description P0AAV8 Confidence 95.92% Date Thu Jan 5 11:13:57 GMT 2012 Rank 14 Aligned Residues 190 % Identity 13% Template d1s7ja_ SCOP info Diaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like Resolution 2.30

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	N	M	L	S	G	V	G	A	F	A	I	E	N	G	L	I	A	A	T	S	P	V	T	R	V	R	I	R	N	V	N	T	G	T	F	I	E	A	D	V	Q	T	P	N	G	V	V	E	Y	E	G	S	A	R	I	D	G	V	P	G	T	A	A	P	V	A	L	T	F	L	N	A	A	G	T	K	T	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.
Template Sequence		C	G	H	A	T	L	A	T	A	F	V	L	F	N	Y	Y	S	V	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	H	F	T	S	Q	S	G	P	L	A	V	T	K	K	.	.	.	.	.	.	.	.	.	E	E	Y	Y	Y	L	D	F	P	Y	I	L	P	E	R	I	.
Template Known Secondary structure																	S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									.	.	.	.	.	.	.	.	.	T	T															.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	F	P	T	D	N	Q	I	D	Y	F	D	D	V	P	V	T	C	I	D	M	A	M	P	V	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	L	D	A	D	K	A	L	L	A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V	S	N	M	V	I	P	K	P	V
Query Conservation
Alig confidence		.	.	.																											.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																											.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	P	I	L	P	E	Y	E	A	A	L	G	T	K	I	Y	E	A	Y	L	G	R	D	L	F	F	V	.	.	.	.	.	.	L	K	D	E	E	T	V	A	K	I	T	P	D	F	S	A	L	K	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V	G	V
Template Known Secondary structure		.	.	.											T	S			S					S	S	S					.	.	.	.	.	.		S																			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S
Template Predicted Secondary structure		.	.	.																											.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																				.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	P	A	Q	K	G	G	A	I	N	V	R	Y	F	M	P	H	S	C	H	R	A	L	A	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q	I	V	P	S	V	G	Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S	N	E	G	Q	D	A	T	T	L	R
Query Conservation
Alig confidence																																									.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		I	V	T	A	S	G	D	S	V	D	F	V	S	R	T	F	F	P	K	L	R	I	N	E	D	P	V	C	G	S	A	H	A	N	L	I	P	Y	W	.	.	.	.	.	G	K	R	L	N	Q	T	T	L	S	A	Y	Q	V	S	P	R	G	G	F	L	T	C	E	V	K	E	N	.	.	.	.	.	.	.	R
Template Known Secondary structure								S	S	S	S								G	G	G	T					S			S	T	T									.	.	.	.	.					T		S								S	S	S										T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	I	R	T	T	R	K	I	F	S	G	E	V	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	I	G	G	T	A	K	L	F	A	K	G	E	A	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions