Job Description P0AAV8 Confidence 21.68% Date Thu Jan 5 11:13:57 GMT 2012 Rank 37 Aligned Residues 89 % Identity 17% Template c3opwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dna damage-responsive transcriptional repressor rph1; PDBTitle: crystal structure of the rph1 catalytic core Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.						80	.
Predicted Secondary structure																																																																					.						.	.	.	.	.
Query SS confidence																																																																					.						.	.	.	.	.
Query Sequence		M	M	R	G	G	T	S	R	G	A	F	L	L	A	E	H	L	P	E	D	Q	T	Q	R	D	K	I	L	M	A	I	M	G	S	G	N	D	L	E	I	D	G	I	G	G	G	N	P	L	T	S	K	V	A	I	I	S	R	S	S	D	P	R	A	D	V	D	.	Y	L	F	A	Q	.	.	.	.	.	V	I
Query Conservation																																																																					.						.	.	.	.	.
Alig confidence															.	.	.																												.	.	.	.	.	.																			.						.	.	.	.	.
Template Conservation															.	.	.																												.	.	.	.	.	.
Template Sequence		Y	I	H	F	G	A	P	K	Q	W	Y	S	I	.	.	.	P	Q	E	D	R	F	K	F	Y	K	F	M	Q	E	Q	F	P	E	E	A	K	N	C	P	E	F	L	.	.	.	.	.	.	R	H	K	M	F	L	A	S	P	K	L	L	Q	E	N	G	I	R	C	N	E	I	V	H	H	E	G	E	F	M	I
Template Known Secondary structure							S								.	.	.		G	G	G											S	S	T	T						S			T	.	.	.	.	.	.	T	T	S											T	T	T										T	T
Template Predicted Secondary structure															.	.	.																												.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	H	E	Q	R	V	D	T	T	P	N	C	G	.	N	M	L	S	G	V	G	A	F	A	I	E
Query Conservation															.
Alig confidence															.							.
Template Conservation																						.
Template Sequence		T	Y	P	Y	G	Y	H	A	G	F	N	Y	G	Y	N	L	A	E	S	V	.	N	F	A	L	E
Template Known Secondary structure				T	T									S	S							.
Template Predicted Secondary structure																						.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions