Job Description P0AAV8 Confidence 95.08% Date Thu Jan 5 11:13:57 GMT 2012 Rank 18 Aligned Residues 179 % Identity 18% Template c3fveA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase mycobacterium2 tuberculosis dapf Resolution 2.60 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		N	C	G	N	M	L	S	G	V	G	A	F	A	I	E	N	G	L	I	A	A	T	.	.	.	.	.	.	.	S	P	V	T	R	V	R	I	R	N	V	N	T	G	T	F	I	E	A	D	V	Q	T	P	N	G	V	V	E	Y	E	G	S	A	R	I	D	G	V	P	G	T	A	A	P	V	A	L	T	F	L
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.															.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	C	G	N	G	V	R	V	F	A	H	Y	L	R	A	S	G	L	E	V	R	D	E	F	V	V	G	S	L	A	G	P	R	P	V	T	C	H	H	V	E	A	A	.	.	.	Y	A	D	V	S	V	D	M	G	K	A	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		T	T											T	T	S				S							T	T												S	S	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		N	A	A	G	T	K	T	G	K	V	F	P	T	D	N	Q	I	D	Y	F	D	D	V	P	V	T	C	I	D	M	A	M	P	V	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	.	L	D	A	D	K	A	L	L	A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V
Query Conservation																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	G	E	A	V	F	H	G	L	A	V	D	V	G	N	P	H	L	A	C	V	D	S	Q	L	T	V	D	G	L	A	A	L	D	V	G	V	S	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						B									S	S	S								T	T			T	T	T	T		S							B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																						.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		S	N	M	V	I	P	K	P	V	L	I	S	P	A	Q	K	G	G	A	I	N	V	R	Y	F	M	P	H	S	C	H	R	A	L	A	.	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q	I	V	P	S	V	G	Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S
Query Conservation																																					.
Alig confidence																			.												.						.													.	.	.	.	.	.	.	.
Template Conservation																			.												.																			.	.	.	.	.	.	.	.
Template Sequence		Q	F	P	D	G	V	N	V	E	V	L	T	A	P	V	D	G	.	A	V	W	M	R	V	H	E	R	G	V	.	G	E	T	R	S	C	G	T	G	T	V	A	A	A	V	A	A	L	.	.	.	.	.	.	.	.	A	A	V	G	S	P	T	G	T	L	T	V	H	V	P	G	G	E	V	V	V	T	V	T
Template Known Secondary structure		T		T	T											B	T	T	.								B	T	T	T	.	B	S		S															.	.	.	.	.	.	.	.			T	T		S	S								T	T
Template Predicted Secondary structure																			.												.																			.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	G	Q	D	A	T	T	L	R	A	S	V	I	R	T	T	R	K	I	F	S	G	E	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		D	A	T	.	.	.	.	.	.	.	S	F	L	R	G	P	S	V	L	V	A	R	G	D	L
Template Known Secondary structure		S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		263	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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