Job Description P0AAV8 Confidence 94.80% Date Thu Jan 5 11:13:57 GMT 2012 Rank 19 Aligned Residues 259 % Identity 21% Template c2otnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of the catalytically active form of diaminopimelate2 epimerase from bacillus anthracis Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	I	P	C	V	M	M	R	G	G	T	S	R	G	A	F	L	L	A	E	H	L	P	E	D	Q	T	Q	R	D	K	I	L	M	A	I	M	G	S	G	N	D	L	E	I	D	G	I	G	G	G	N	P	L	T	S	K	V	A	I	I	S	R	S	S	D	P	R	A	D	V	D	Y	L	F	A	Q	V
Query Conservation
Alig confidence																																										.	.	.	.	.								.	.	.	.	.																			.	.	.	.	.
Template Conservation																																										.	.	.	.	.								.	.	.	.	.																			.	.	.	.	.
Template Sequence		M	S	Q	F	S	F	T	K	M	H	G	L	G	N	S	Y	I	Y	V	N	M	F	E	E	Q	I	P	E	E	D	L	A	L	V	A	E	K	V	S	N	.	.	.	.	.	I	N	T	G	I	G	A	.	.	.	.	.	D	G	M	I	L	I	C	P	S	D	V	A	P	V	K	M	R	M	.	.	.	.	.
Template Known Secondary structure													S	S								T	T	T					G	G	G											.	.	.	.	.	T	T	T	S				.	.	.	.	.	S									S	S	S	S						.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.								.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		I	V	H	E	Q	R	V	D	T	T	P	N	.	.	.	.	.	.	C	G	N	M	L	S	G	V	G	A	F	A	I	E	N	G	L	I	A	A	T	S	P	V	T	R	V	R	I	R	N	V	N	T	G	T	F	I	E	A	D	V	Q	T	P	N	G	V	V	E	Y	E	G	S	A	R	I	D	G	V	P	G
Query Conservation														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.					.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	F	N	N	D	G	S	E	G	K	S	C	G	N	G	L	R	C	V	A	K	Y	A	Y	E	H	K	L	V	E	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	T	I	E	T	L	A	G	I	V	.	.	.	.	T	A	E	V	T	V	E	E	G
Template Known Secondary structure		.	.	.	.	.	.	.	.			T	T	S		B				T	T	T	T											T	T	S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S				.	.	.	.							S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
										66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																		.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	A	P	V	A	L	T	F	L	N	A	A	G	T	K	T	G	K	V	F	P	T	D	N	Q	I	D	Y	F	.	.	.	.	.	.	.	.	.	.	D	D	V	P	V	T	C	I	D	M	A	M	P	V	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	L	D	A	D	K	A	L	L
Query Conservation																																.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																																	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	L	A	K	I	D	M	G	A	P	.	.	R	L	T	R	A	E	I	P	M	L	G	E	G	E	T	P	F	I	R	E	N	F	L	Y	N	N	H	R	Y	A	F	T	A	V	S	M	G	N	P	H	A	V	I	F	V	D	D	V	.	.	.	.	.	.	.	.	.	E	Q	A	P	L	T	T	L	G
Template Known Secondary structure		S												.	.	B		S	G	G	G	T	T			S	S			S	S	S								S	S										S	S	S								S		G	.	.	.	.	.	.	.	.	.	G	G			T	T	T
Template Predicted Secondary structure														.	.																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V	S	N	M	V	I	P	K	P	V	L	I	S	P	A	Q	K	G	G	A	I	N	V	R	Y	F	M	P	H	S	C	H	R	A	L	A	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q	I	V	P	S	V	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		P	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	T	H	E	M	F	P	E	R	V	N	V	E	F	I	E	I	L	N	E	E	.	E	M	N	F	R	V	W	E	R	.	.	.	.	.	.	.	C	G	T	G	A	C	A	A	V	V	A	S	I	L	N	G	K	M	.	.	.	.	.	.	.	E	R
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	T		T	T		T	T											S	S	S	.										.	.	.	.	.	.	.																T	S	S	.	.	.	.	.	.	.		T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.													190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S	N	E	G	Q	D	A	T	T	L	R	A	S	V	I	R	T	T	R	K	I	F	S	G	E	V
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		G	K	E	I	T	V	H	L	A	G	G	D	L	M	I	A	W	T	E	E	G	N	.	.	.	.	.	.	V	L	M	K	G	P	A	E	V	I	C	R	G	V	Y
Template Known Secondary structure		T	S							S	S									T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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