Job Description P0AAV8 Confidence 87.56% Date Thu Jan 5 11:13:57 GMT 2012 Rank 23 Aligned Residues 240 % Identity 17% Template c2azpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa1268; PDBTitle: crystal structure of pa1268 solved by sulfur sad Resolution 2.13 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	I	I	S	R	S	S	D	P	R	A	D	V	D	Y	L	F	A	Q	V	I	V	H	E	Q	R	V	D	T	T	P	N	C	G	N	M	L	S	G	V	G	A	F	A	I	E	N	G	L	I	A	A	T	S	P	V	T	R	V	R	I	R	N	V	N	T	G	T	F	I	E	A	D	V	Q	T	P	N	G
Query Conservation
Alig confidence																							.	.	.							.	.	.																			.	.	.	.								.						.							.	.	.	.	.
Template Conservation																							.	.	.							.	.	.																			.	.	.	.								.						.							.	.	.	.	.
Template Sequence		G	A	L	L	C	A	P	V	D	P	E	A	C	A	G	V	I	F	F	N	N	.	.	.	S	G	Y	L	G	M	.	.	.	C	G	H	G	T	I	G	L	V	A	S	L	A	H	L	G	R	I	.	.	.	.	G	P	G	V	H	R	I	.	E	T	P	V	G	.	E	V	E	A	T	L	.	.	.	.	.
Template Known Secondary structure									S	S	T	T	S	S								S	.	.	.	S	S	B		S		.	.	.															T	T	S		.	.	.	.		S						.			T	T		.							.	.	.	.	.
Template Predicted Secondary structure																							.	.	.							.	.	.																			.	.	.	.								.						.							.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.		.	.	.	.	.		.	.	120	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	Y	E	G	S	A	R	I	D	G	V	P	G	T	A	A	P	V	A	L	T	F	L	N	A	A	G	T	K	T	G	K	V	F	P	T	D	N	Q	I	D	Y	F	D	D	V	P	V	T	C	I	D	M	A	M	P	V	V	I	I	P	A	E	Y	L	G	K	T	G	Y	E	L	P	A	E	L	D	A
Query Conservation
Alig confidence		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	H	E	D	G	S	V	S	V	R	N	V	P	A	Y	R	Y	R	R	Q	V	S	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	G	I	G	R	V	S	G	D	I	A	W	G	G	N	W	F	F	L	V	A	G	H	G	Q	R	L	A	G	D	N	L	D	A	.	.	.	.
Template Known Secondary structure		.	.		T	T	S							S		B											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T										S	S	S							S						S	T	T					.	.	.	.
Template Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
				124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		D	K	A	L	L	A	R	I	E	S	I	R	L	Q	A	G	K	A	M	G	L	G	D	V	S	N	M	V	I	P	K	P	V	L	I	S	P	A	Q	K	G	G	A	I	N	V	R	Y	F	M	P	H	S	C	H	R	A	L	A	.	I	T	G	A	I	A	I	S	S	S	C	A	L	E	G	T	V	T	R	Q
Query Conservation																																																													.
Alig confidence		.	.	.	.																																		.																						.
Template Conservation		.	.	.	.																																		.
Template Sequence		.	.	.	.	L	T	A	Y	T	V	A	V	Q	Q	A	L	D	D	Q	D	I	R	G	E	D	G	G	A	I	D	H	I	E	L	F	A	D	.	D	P	H	A	D	S	R	N	F	V	L	C	P	G	K	A	Y	D	R	S	P	C	G	T	G	T	S	A	K	L	A	C	L	A	A	D	G	K	L	L	P	G
Template Known Secondary structure		.	.	.	.															T	T		B		T	T	S		B										.		T	T										T	T	S		B		S	S																T	T	S	S		T	T
Template Predicted Secondary structure		.	.	.	.																																		.
Template SS confidence
						182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	V	P	S	V	G	Y	G	N	I	N	I	E	H	P	S	G	A	L	D	V	H	L	S	.	N	E	G	Q	D	A	T	T	L	R	A	S	V	I	R	T	T	R	K	I	F	S	G	E	V	Y	L
Query Conservation																										.
Alig confidence		.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	Q	P	W	R	Q	A	S	V	I	G	S	Q	F	E	G	R	Y	E	W	L	D	G	Q	P	G	G	P	I	V	P	T	I	R	G	R	A	H	V	S	A	E	A	T	L	L	L
Template Known Secondary structure		.	.	.	.	.	.								T	T	S										G	G	G		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions