Job Description P0A752 Confidence 99.01% Date Thu Jan 5 11:04:50 GMT 2012 Rank 31 Aligned Residues 146 % Identity 19% Template c3op1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae Resolution 2.49 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	L	Q	A	L	F	G	G	T	F	D	P	V	H	Y	G	H	L	K	P	V	E	T	L	A	N	L	I	G	L	T	R	V	T	I	I	P	.	.	.	.	.	.	.	.	.	.	.	N	N	V	P	P	H	R	P	Q	P	E	A	N	S	V	Q	R	K	H	M	L	E	L	A	I	A	D	K	P	L	F
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																																												.	.
Template Sequence		P	S	D	S	V	V	V	L	G	Y	F	D	G	I	H	K	G	H	Q	E	L	F	R	V	A	N	K	A	A	R	K	D	L	L	P	I	V	V	X	T	F	N	E	S	P	K	I	A	L	E	P	Y	H	P	D	L	F	L	H	I	L	N	P	A	E	R	E	R	K	L	K	R	E	G	.	.	V	E	E	L
Template Known Secondary structure			S							S			S	S																S	S	T	T										S	S		T					S				G	G	G	G		B	S	S													T	.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	E	R	E	L	K	R	N	A	P	S	Y	T	A	Q	T	L	K	E	W	R	Q	E	Q	G	P	D	V	P	L	A	F	I	I	G	Q	D	S	L	L	T	F	P	T	W	Y	E	Y	E	T	I	L	D	N	A	H	L	I	V	C	R	R	P	G	Y	P	L	E	M	A	Q	P	Q	Y	Q	Q	W	L
Query Conservation
Alig confidence																	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	D	F	S	S	Q	F	A	S	L	T	A	Q	.	E	F	F	A	T	Y	I	K	A	X	.	.	.	N	A	K	I	I	V	A	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T					.											.	.	.	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.											.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.																								.	130	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		E	D	H	L	T	H	N	P	E	D	L	H	L	Q	P	A	G	K	I	Y	L	A	E	T	P	W	F	N	.	.	.	I	S	A	T	I	I	R	E	R	L	Q	N	G	E
Query Conservation																														.	.	.
Alig confidence		.	.																											.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	D	K	K	T	A	E	D	L	K	N	Y	F	D	G	E	V	I	I	V	P	P	V	E	D	E	K	G	K	I	S	S	T	R	I	R	Q	A	I	L	D	G	N
Template Known Secondary structure		.	.	T	T	T	B		S	T	T						S	S									B		S	S		B													T
Template Predicted Secondary structure		.	.
Template SS confidence
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions