Job Description P0A752 Confidence 99.21% Date Thu Jan 5 11:04:50 GMT 2012 Rank 28 Aligned Residues 92 % Identity 17% Template c3glvB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:lipopolysaccharide core biosynthesis protein; PDBTitle: crystal structure of the lipopolysaccharide core biosynthesis protein2 from thermoplasma volcanium gss1 Resolution 1.99 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		M	K	S	L	Q	A	L	F	G	G	T	F	D	P	V	H	Y	G	H	L	K	P	V	E	T	L	A	N	L	I	G	L	T	R	V	T	I	I	P	N	N	V	P	P	H	R	P	Q	P	E	A	.	N	S	V	Q	R	K	H	M	L	E	L	A	I	A	D	K	P	L	F	T	L	D	E	R	E	L	K	R
Query Conservation																																																					.
Alig confidence				.	.																																																.											.																.	.
Template Conservation				.	.																																																											.																.	.
Template Sequence		M	I	.	.	R	V	M	A	T	G	V	F	D	I	L	H	L	G	H	I	H	Y	L	K	E	S	K	K	L	G	D	E	L	V	V	V	V	A	R	D	S	T	A	R	N	N	G	K	I	P	I	F	D	E	N	S	R	L	A	L	I	S	.	E	L	K	V	V	D	R	A	I	L	G	H	E	G	D	.	.
Template Known Secondary structure				.	.									S	S														T	T	S	S														T	T	T				S	S											.	T	S	T	T		S							T	T		.	.
Template Predicted Secondary structure				.	.																																																											.																.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	P	S	Y	T	A	Q	T	L	K	E	W	R	Q	E	Q	G	P	D	V	P	L	A	F	I	I	G	Q	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	M	M	K	T	V	I	E	V	K	P	D	.	.	.	I	I	T	L	G	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											S	.	.	.						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
											76	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions