Job Description P0A752 Confidence 99.84% Date Thu Jan 5 11:04:50 GMT 2012 Rank 23 Aligned Residues 157 % Identity 18% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		K	S	L	Q	A	L	F	G	G	T	F	D	P	V	H	Y	G	H	L	K	P	V	E	T	L	A	N	L	I	G	L	T	R	V	T	I	I	P	N	N	V	P	P	H	R	.	.	.	.	.	.	P	Q	P	E	A	N	S	V	Q	R	K	H	M	L	E	L	A	I	A	D	K	P	L	F	T	L	D	E	R
Query Conservation																																															.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	K	V	G	V	I	F	G	K	F	Y	P	V	H	T	G	H	I	N	X	I	Y	E	A	F	S	K	V	D	E	L	H	V	I	V	C	S	D	T	V	R	D	L	K	L	F	Y	D	S	K	X	K	R	X	P	T	V	Q	D	R	L	R	W	X	Q	Q	I	F	K	Y	Q	K	N	Q	I	F	I	H	H
Template Known Secondary structure													S	S														T	T		S																				T	T		S	S															T	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		E	L	K	R	N	A	P	S	Y	T	A	.	.	.	.	.	.	Q	T	L	K	E	W	R	Q	E	Q	G	P	D	V	P	L	A	F	I	I	G	Q	D	S	L	L	T	F	P	T	W	Y	E	Y	E	T	I	L	D	N	A	H	L	I	V	C	R	R	P	G	Y	P	L	E	M	A	Q	P	Q	Y	Q	Q	W
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	E	D	G	I	P	S	Y	P	N	G	W	Q	S	W	S	E	A	V	K	T	L	F	H	E	K	H	F	E	P	S	I	V	F	S	S	E	P	Q	D	K	A	P	Y	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S			T	T	S																T	T				S					S		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	H	L	T	H	N	P	E	D	L	H	L	Q	P	A	G	K	I	Y	L	A	E	T	P	W	F	N	I	S	A	T	I	I	R	E	R	L	Q	N	G	E	S	C	E	D	L	L	P	E	P	V	L	T	Y	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	L	E	V	S	L	V	D	P	D	R	T	F	F	N	V	S	A	T	K	I	R	T	T	P	F	Q	Y	.	.	.	W	K	F	I	P	K	E	A	R	P	F	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	S			S	S											G	G	G	G	.	.	.	G	G	G	S		T	T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
															185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions