Return to main results Retrieve Phyre Job Id

Job DescriptionP16429
Confidence4.25%DateThu Jan 5 11:35:05 GMT 2012
Rank38Aligned Residues22
% Identity23%Templatec2ow8v_
PDB info PDB header:ribosomeChain: V: PDB Molecule: PDBTitle: crystal structure of a 70s ribosome-trna complex reveals functional2 interactions and rearrangements. this file, 2ow8, contains the 30s3 ribosome subunit, two trna, and mrna molecules. 50s ribosome subunit4 is in the file 1vsa.
Resolution3.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   523......530.........540 ....
Predicted Secondary structure 

















.



Query SS confidence 

















.



Query Sequence  GDRLPSRSRGAAWVCGYD. HEKS
Query Conservation              
 

  .    
Alig confidence 

















.



Template Conservation 






















Template Sequence  GKGDRRTRRGKIWRGTYGKYRPR
Template Known Secondary structure 

S

SSSTTT

GGGS

Template Predicted Secondary structure 



















Template SS confidence 






















   2.......10.........20....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions