Job Description P17443 Confidence 99.87% Date Thu Jan 5 11:36:10 GMT 2012 Rank 26 Aligned Residues 346 % Identity 14% Template d2bisa1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Glycosyl transferases group 1 Resolution 2.8

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		7	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	M	V	M	A	G	G	.	.	.	.	.	T	G	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S
Query Conservation										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	L	L	G	F	E	F	L	P	V	K	V	G	G	L	A	E	A	L	T	A	I	S	E	A	L	A	S	L	G	H	E	V	L	V	F	T	P	S	H	G	R	F	Q	G	E	E	I	G	K	I	R	V	F	G	E	E	V	Q	V	K	V	S	Y	E	E	R	G	N	L	R	I	Y	R	I	G	G	G
Template Known Secondary structure								S			T	T			S	S	S															T	T										T	T	S	S											S	S	S												T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		64	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure										.	.																								.	.	.	.	.																																							.	.	.	.
Query SS confidence										.	.																								.	.	.	.	.																																							.	.	.	.
Query Sequence		G	L	R	G	K	G	I	K	.	.	A	L	I	A	A	P	L	R	I	F	N	A	W	R	Q	A	R	A	I	M	K	A	Y	.	.	.	.	.	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	G	L	.	.	.	.
Query Conservation										.	.																								.	.	.	.	.																																							.	.	.	.
Alig confidence										.	.																								.	.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		L	L	D	S	E	D	V	Y	G	P	G	W	D	G	L	I	R	K	A	V	T	F	G	R	A	S	V	L	L	L	N	D	L	L	R	E	E	P	L	P	D	V	V	H	F	H	D	W	H	T	V	F	A	G	A	L	I	K	K	Y	F	K	I	P	A	V	F	T	I	H	R	L	N	K	S	K	L	P	A	F
Template Known Secondary structure		G	G	G		S		T	T		S																								T	T	S	S				S						T	G	G	G																				S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																			133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.												.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	.	.	.	.	.	.	.	.	.	.	.	P	G	A	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	H	E	A	G	L	S	E	L	A	P	Y	P	D	I	D	P	E	H	T	G	G	Y	I	A	D	I	V	T	T	V	S	R	G	Y	L	I	D	E	W	G	F	F	R	N	F	E	G	K	I	T	Y	V	F	N	G	I	D	C	S	F	W	N	E	S	Y	L	T	G	S	R	D	E	R	K	K	S	L	L
Template Known Secondary structure						T	T		G	G	G			S	S												S	S					S								T					G	G	G	T	T	T										T	T	T	S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	.	.	.	.	.	S	V	T	I	W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A
Query Conservation																																						.	.	.	.	.
Alig confidence																																						.	.	.	.	.
Template Conservation
Template Sequence		S	K	F	G	M	D	E	G	V	T	F	M	F	I	G	R	F	D	R	G	Q	K	G	V	D	V	L	L	K	A	I	E	I	L	S	S	K	K	E	F	Q	E	M	R	F	I	I	I	G	K	G	D	P	E	L	E	G	W	A	R	S	L	E	E	K	H	G	N	V	K	V	I	T	E	M	L	S	R	E	F
Template Known Secondary structure				T	T			S								S		B		S	S	S	S													T	T	S	G	G	G	G	G									B														T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	.	.	S	R	E	T	L
Query Conservation																																																																										.	.	.
Alig confidence																																																			.									.	.													.	.	.
Template Conservation																																																			.									.	.
Template Sequence		V	R	E	L	Y	G	S	V	D	F	V	I	I	P	S	Y	F	E	P	F	G	L	V	A	L	E	A	M	C	L	G	A	I	P	I	A	S	A	V	G	G	L	R	D	I	I	T	N	E	.	T	G	I	L	V	K	A	G	.	.	D	P	G	E	L	A	N	A	I	L	K	A	L	E	L	S	R	S	D	L
Template Known Secondary structure							T	T		S							S			S	S									T	T	T							S		T	T							T	T	.	T						T	T	.	.														T	T	T	T	S		T
Template Predicted Secondary structure																																																			.									.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.			.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	M	A	E	R	A	R	A	A	S	I	P	D	A	T	E	R	V	A	N	E	V	S	R	V	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	F	R	E	N	C	K	K	R	A	M	S	F	S	W	E	K	S	A	E	R	Y	V	K	A	Y	T	G
Template Known Secondary structure															S															T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions