Job Description P17443 Confidence 98.39% Date Thu Jan 5 11:36:10 GMT 2012 Rank 51 Aligned Residues 149 % Identity 8% Template c3qhpB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type 1 capsular polysaccharide biosynthesis protein j PDBTitle: crystal structure of the catalytic domain of cholesterol-alpha-2 glucosyltransferase from helicobacter pylori Resolution 1.50 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I	W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	K	I	A	M	V	G	R	Y	S	N	E	K	N	Q	S	V	L	I	K	A	V	A	L	S	K	Y	K	Q	D	I	V	L	L	L	K	G	K	G	P	D	E	K	K	I	K	L	L	A	Q	K	L	G	V	K	A	E	F	G	F	V	L	L	E	I	L	K	T	C	T	L	Y	V	H	A	A	N	V	E
Template Known Secondary structure									S			S	T	T	T												S	T	T	G	G	G									S	T	T												T														T	T									S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	.	S	R	E	T	L	L	T	M	A	E	R	A	R	A	A	S	I	P	D
Query Conservation																																																													.	.
Alig confidence																									.	.	.	.	.	.	.																.	.													.	.
Template Conservation																									.	.	.	.	.	.	.																.	.
Template Sequence		A	I	A	C	L	E	A	I	S	V	G	I	V	P	V	I	A	N	S	P	L	S	A	.	.	.	.	.	.	.	T	R	Q	F	A	L	D	E	R	S	L	F	E	P	N	.	.	N	A	K	D	L	S	A	K	I	D	W	W	L	E	N	K	L	E	R	E	R	M	Q	N	E	Y	A	K	S	A	L	N	Y
Template Known Secondary structure											T	T									T	T		T	.	.	.	.	.	.	.	T	G	G	G		S	S	G	G	G				T	T	.	.																														G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.																.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310								.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions