Job Description P17443 Confidence 93.32% Date Thu Jan 5 11:36:10 GMT 2012 Rank 316 Aligned Residues 329 % Identity 8% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		S	G	Q	G	K	R	L	M	V	M	A	G	G	T	G	G	H	V	.	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S	G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I
Query Conservation																				.
Alig confidence																				.																										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	K	P	V	M	V	V	L	L	E	H	F	H	S	A	H	S	I	Y	R	T	H	S	T	S	M	I	A	A	R	E	H	F	Y	L	I	G	L	G	S	P	S	V	.	.	D	Q	A	G	Q	E	V	F	D	E	F	H	L	V	A	G	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M
Template Known Secondary structure		T	T	B								S	S			T	T	S													G	G	G	T									T	T	S	.	.						T	T	S	S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.																.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		F	N	A	W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	G	L	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	G	A	F	P	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		K	Q	K	L	E	F	I	R	S	V	C	E	S	N	G	A	A	I	F	Y	M	P	S	I	G	M	D	M	T	T	I	F	A	S	N	T	R	L	A	P	I	Q	A	.	.	.	.	I	A	L	G	H	P	A	T	T	H	S	D	F	I	E	Y	V	I	V	E	D	D	Y	V	G	S	E	E	C	F	S	E	T
Template Known Secondary structure																T		S					S			S	S	S							T	T	S			S	S				.	.	.	.				S	S		S					T	T								G	G	G		S		G	G	G		S	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
				154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																						.																														.	.
Query SS confidence		.	.																																						.																														.	.
Query Sequence		.	.	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	.	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I	W	H	Q	S	G	.	.	K	G	S	Q	Q	S	V	E	Q
Query Conservation		.	.																																						.																														.	.
Alig confidence		.	.																																						.																														.	.
Template Conservation
Template Sequence		L	L	R	L	P	K	D	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N	G	I	T	H	P	Y	V	E
Template Known Secondary structure							T	T	S	S						T	T			S	S							S			S										S	T	T																	S	S										T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	.	.	.	.	.	.	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K
Query Conservation																																		.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																					.	.
Template Conservation																																																												.	.
Template Sequence		R	F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	G	N	T	N	G	I	I	D	M	V	T	L	G	L	V	G	V	C	K	T	.	.	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L	P	E
Template Known Secondary structure									G	G	G																		T		S						S	S	S			S									T	T								.	.		S	S													T	T			G
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.			.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
			303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.																				.																						.	.	.	.	.
Query SS confidence		.																				.																						.	.	.	.	.
Query Sequence		.	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	S	R	E	T	L	L	T	M	A	E	R	A	R	A	A	S	I	P	D	A	T	.	.	.	.	.	E	R	V	A	N	E	V	S	R	V	A	R	A
Query Conservation		.																				.																						.	.	.	.	.
Alig confidence		.							.	.												.																						.	.	.	.	.
Template Conservation									.	.
Template Sequence		W	L	I	A	N	T	V	.	.	D	E	Y	V	E	R	A	V	R	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N	A
Template Known Secondary structure		G	G			S	S		.	.																											S		T							S			T
Template Predicted Secondary structure									.	.
Template SS confidence
		558	.	560	.	.	.	.			.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions