Job Description P17443 Confidence 99.79% Date Thu Jan 5 11:36:10 GMT 2012 Rank 35 Aligned Residues 337 % Identity 10% Template c3oy2A_ PDB info PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a Resolution 2.31 Å

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		7	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		R	L	M	V	M	A	G	G	T	.	.	.	G	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S	G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I	F	N	A
Query Conservation											.	.	.
Alig confidence											.	.	.															.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	I	I	V	G	A	H	S	S	V	P	S	G	Y	G	R	V	M	R	A	I	V	P	R	I	.	S	K	A	H	E	V	I	V	F	G	I	H	A	F	G	R	S	V	.	.	.	.	.	.	.	.	.	.	.	H	A	N	I	E	E	F	D	A	Q	T	A	E	H	V	R	G	L	N	E	Q	G	F	Y
Template Known Secondary structure										T	T			S														.	T	T	T	S								S			S			S	.	.	.	.	.	.	.	.	.	.	.		S	S	S												T	T			S	T	T
Template Predicted Secondary structure																												.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	.	.	.	.	.	.	.	N	G	I	A	G	L	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	G	L	S	E	F	I	D	V	H	K	P	D	I	V	M	I	Y	N	D	P	I	V	I	G	N	Y	L	L	A	M	G	K	C	S	H	R	T	K	I	V	L	Y	V	D	L	V	S	K	N	I	R	E	N	L	W	W	I	F	S	H	P	K	V	V	G	V	M	A	M	S	K	C	W	I	S	D	I	C
Template Known Secondary structure															S																		G	G	G			S												S	B	S			G	G	G	G	G	G	G	G		T	T							S	S	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.																																																											.	.	.	.
Query SS confidence		.	.																																																											.	.	.	.
Query Sequence		.	.	G	A	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	.	.	.	.	L	G	D	S	V	T	I	W	H	Q	S	G	K	G	S	Q
Query Conservation		.	.																																																											.	.	.	.
Alig confidence		.	.																																																											.	.	.	.
Template Conservation
Template Sequence		N	Y	G	C	K	V	P	I	N	I	V	S	H	F	V	D	T	K	T	I	Y	D	A	R	K	L	V	G	L	S	E	Y	N	D	D	V	L	F	L	N	M	N	R	N	T	A	R	K	R	L	D	I	Y	V	L	A	A	A	R	F	I	S	K	Y	P	D	A	K	V	R	F	L	C	N	S	H	H	E	S	K
Template Known Secondary structure			T	T			S															T	T					T	T		G	G	G	T	T	S							S		S	S	G	G	G	T																T	T											T	T		S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	.	.	.	.	.	.	.	.	.	.	.	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	L	H	S	I	A	L	R	E	L	V	A	S	G	V	D	N	V	F	T	H	L	N	K	I	M	I	N	R	T	V	L	T	D	E	R	V	D	M	M	Y	N	A	C	D	V	I	V	N	C	S	S	G	E	G	F	G	L	C	S	A	E	G	A	V	L	G	K	P	L	I	I	S	A	V	G	G	A	D
Template Known Secondary structure																T		S							T	T						S															S							S			S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.																.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.														.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.														.
Query Sequence		L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	S	R	E	T	.	L	L	T	M	A	E	R	A	R	A	A	S	I	.	P	D	A	T	E	R	V	A	N	E	V	S	R	V	A	R	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.														.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.														.
Template Conservation
Template Sequence		D	Y	F	S	G	D	C	V	Y	K	I	K	P	S	A	W	I	S	V	D	D	R	D	G	I	G	G	I	E	G	I	I	D	V	D	D	L	V	E	A	F	T	F	F	K	D	E	K	N	R	K	E	Y	G	K	R	V	Q	D	F	V	K	T	K	P	T	W	D	D	I	S	S	D	I	I	D	F	F	N	S
Template Known Secondary structure				S		T	T	T	S												T	T	T		S	S																			T	T	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions