Job Description P17443 Confidence 99.83% Date Thu Jan 5 11:36:10 GMT 2012 Rank 31 Aligned Residues 270 % Identity 12% Template c3hbmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:udp-sugar hydrolase; PDBTitle: crystal structure of pseg from campylobacter jejuni Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.				.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.	.		.
Query SS confidence												.	.	.		.
Query Sequence		K	R	L	M	V	M	A	G	G	T	.	.	.	G	.	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S	G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I	F
Query Conservation												.	.	.		.
Alig confidence												.	.	.		.														.	.	.	.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	V	L	F	R	S	D	S	S	S	Q	I	G	F	G	H	I	K	R	D	L	V	L	A	K	Q	Y	.	.	.	.	S	D	V	S	F	A	C	L	P	L	E	.	.	G	S	L	I	D	E	I	P	Y	P	V	Y	E	L	S	S	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T	B	S											T	T		.	.	.	.	S	S									T	.	.	T			G	G	G			S						S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	A	W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	.	G	I	P	V	V	L	H	E	Q	N	G	I	A	G	L	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	G	A	F	P	N	A	E	V	V	G	N
Query Conservation																																						.
Alig confidence		.	.																																			.
Template Conservation		.	.
Template Sequence		.	.	I	Y	E	L	I	N	L	I	K	E	E	K	F	E	L	L	I	I	D	H	Y	G	I	S	V	D	D	E	K	L	I	K	L	E	T	G	V	K	I	L	S	F	D	D	E	I	K	P	H	H	C	D	I	L	L	N	V	N	A	Y	A	K	A	S	D	Y	E	G	L	V	P	K	C	E	V	R	C	G
Template Known Secondary structure		.	.												T		S							T	T																						S	S							S						S	T	T			G	G	G	G	T	T	T									S
Template Predicted Secondary structure		.	.
Template SS confidence
				58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I	W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V
Query Conservation
Alig confidence						.																																					.	.	.
Template Conservation						.																																					.	.	.
Template Sequence		F	S	Y	A	.	L	I	R	E	E	F	Y	Q	E	A	K	E	N	R	K	K	K	Y	D	F	F	I	C	X	G	G	T	D	I	K	N	L	S	L	Q	I	.	.	.	A	S	E	L	P	K	T	K	I	I	S	I	A	T	S	S	S	N	P	N	L	K	K	L	Q	K	F	A	K	L	H	N	N	I	R	L
Template Known Secondary structure		G	G	G		.										T	T															S			T	T							.	.	.				S		T	T	S								T	T		T	T										T		S	S
Template Predicted Secondary structure						.																																					.	.	.
Template SS confidence
		137	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q
Query Conservation
Alig confidence																								.																	.	.	.
Template Conservation																								.																	.	.	.
Template Sequence		F	I	D	H	E	N	I	A	K	L	X	N	E	S	N	K	L	I	I	S	A	S	.	S	L	V	N	E	A	L	L	L	K	A	N	F	K	A	I	.	.	.	C	Y	V	K	N	Q	E	S	T	A	T	W	L	A	K	K	G	Y	E	V	E	Y	K	Y	L	E
Template Known Secondary structure				S		S								T								S	S	.									T	T							.	.	.			S	G	G	G										T	T						G	G	G	S
Template Predicted Secondary structure																								.																	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions