Job Description P17443 Confidence 99.51% Date Thu Jan 5 11:36:10 GMT 2012 Rank 40 Aligned Residues 330 % Identity 9% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																				.
Predicted Secondary structure															.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	K	R	L	M	V	M	A	G	G	T	G	.	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation															.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		R	P	C	Y	L	V	L	S	S	H	D	F	R	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	G	T	.	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F
Template Known Secondary structure										S	S		T	T		S	S															S		.							S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I	F	N	A	W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	G	L	T	.	.	.	.	.	.	.	.	.	N
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	E	S	D	V	I	V	F	E	S	G	I	A	V	A	F	I	E	L	A	K	R	V	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	I	N	V	A	S	Y	I	E	R	E	F
Template Known Secondary structure				S		G	G	G																											S						S	S	G	G	G	G	G									T	T	S							S	S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	G	A	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		D	R	V	A	P	T	L	D	V	I	A	L	V	S	P	A	M	A	A	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N	L	D	Q	L	G	D	P	S	P	Y	A	E	G	I	H	A	V	A	V	G	S	M	L	F	D	P	.	E	F	F	V	V	A	S	K	A	F	P	Q	V	T	F	H
Template Known Secondary structure					G	G	G		S					S		G	G	G	G	G	G		S		S	T	T								B		T	T					T		S		S			S	S									T	T	B			.											T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P
Query Conservation
Alig confidence																				.	.																																																												.
Template Conservation																				.	.																																																												.
Template Sequence		V	I	G	S	G	M	G	R	H	P	G	Y	G	D	N	V	I	V	.	.	Y	G	E	M	K	H	A	Q	T	I	G	Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P	V	Y	L	A	D	S	S	M	K	L	L	Q	Y	D	F	F	G	L	P	A	V	C	P	N	A	V	V	G	P	Y	.
Template Known Secondary structure				S		S	S				T	T			T	T				.	.															T		S						B	S		S		S		T	T														T	T							G	G	G	T		S		.
Template Predicted Secondary structure																				.	.																																																												.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	S	R	E	T	L	L	T	M	A	E	R	A	R	A	A	S	I	P	D	A	T	E	R	V	A	N	E	V	S	R
Query Conservation
Alig confidence		.	.	.	.											.	.																.	.	.	.	.	.	.
Template Conservation		.	.	.	.											.	.																.	.	.	.	.	.	.
Template Sequence		.	.	.	.	K	S	R	F	G	Y	T	P	G	N	.	.	A	D	S	V	I	A	A	I	T	Q	A	L	E	A	P	.	.	.	.	.	.	.	R	V	R	Y	R	Q	C	L	N	W	S	D	T	T	D	R	V	L	D
Template Known Secondary structure		.	.	.	.	S	S						T	T		.	.																.	.	.	.	.	.	.					S				B
Template Predicted Secondary structure		.	.	.	.											.	.																.	.	.	.	.	.	.
Template SS confidence
						329	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.								.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions