Job Description P17443 Confidence 99.97% Date Thu Jan 5 11:36:10 GMT 2012 Rank 7 Aligned Residues 334 % Identity 15% Template c2p6pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Resolution 1.88 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																				.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	M	V	M	A	G	G	T	G	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		R	I	L	F	V	A	A	G	S	P	A	T	V	F	A	L	A	P	L	A	T	A	A	R	N	A	G	H	Q	V	V	M	A	A	N	Q	D	M	.	.	G	P	V	V	T	G	V	G	L	P	A	V	A	T	T	D	L	P	I	R	H	F	I	T	T	D	R	E	G	R	P	E	A	I	P	S	D	P	V	A
Template Known Secondary structure									S	S																	T	T									G	G	G	.	.						T	T	T						S		S	S		G	G	G	G	S		B		T	T	S		B					S	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		K	G	I	K	A	L	I	A	A	P	L	R	I	F	N	A	W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	G	L	T	N	K	W	L	A	K	I	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	R	F	T	G	R	W	F	A	R	M	A	A	S	S	L	P	R	M	L	D	F	S	R	A	W	R	P	D	L	I	V	G	G	T	M	S	Y	V	A	P	L	L	A	L	H	L	G	V	P	H	A	R	Q	T	W	D	A	V	D	A	D	G	I	H	P	G	A	D	A	E	L	R	P	E	L	S	E	L
Template Known Secondary structure																															S						T	T		T										T								S	S	S				T	T	T								T							T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
										141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	T	K	V	M	Q	A	F	P	G	A	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G	G	S	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	E	R	L	P	A	P	D	L	F	I	D	I	C	P	P	S	L	R	P	A	N	A	A	P	A	R	M	M	R	H	V	A	T	S	R	Q	C	P	L	E	P	W	M	Y	T	R	D	T	R	Q	R	V	L	V	T	S	G	D	R	N	F	D	F	L	R	G	L	A	K	D	L	V	R	W	D	V	E	L
Template Known Secondary structure		T		S	S					S						S		G	G	G	S		S	S																				G	G	G	G				S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		I	V	A	A	P	D	T	V	A	E	A	L	R	A	E	V	P	Q	A	.	.	.	.	.	.	.	.	.	R	V	G	W	T	P	L	D	V	V	A	P	T	C	D	L	L	V	H	H	A	G	G	V	S	T	L	T	G	L	S	A	G	V	P	Q	L	L	I	.	.	.	P	K	G	S	V	L	E	A	P	A
Template Known Secondary structure																		T	T	S	.	.	.	.	.	.	.	.	.			S								G	G	G		S							S		S									T							.	.	.			S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	.	S	R	E	T	L	L	T	M	A	E	R	A	R	A	A	S	I	P	D	A	T	E	R	V	A	N	E	V	S	R	V	A	R
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		R	R	V	A	D	Y	G	A	A	I	A	L	L	P	G	E	D	S	T	E	A	I	A	D	S	C	Q	E	L	Q	A	K	D	T	Y	A	R	R	A	Q	D	L	S	R	E	I	S	G	M	P	L	P	A	T	V	V	T	A	L	E	Q	L	A	H
Template Known Secondary structure								T	S						T	T	T																																T	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions