Job Description P27127 Confidence 99.51% Date Thu Jan 5 11:43:14 GMT 2012 Rank 42 Aligned Residues 342 % Identity 11% Template d1rrva_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F	L	R	R	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																													.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																													.	.
Template Sequence		M	R	V	L	L	S	V	.	.	.	C	G	T	R	G	D	V	E	I	G	V	A	L	A	D	R	L	K	A	L	G	V	Q	T	R	M	C	A	.	.	P	P	A	A	E	E	R	L	A	E	V	G	V	P	H	V	P	V	G	L	P	Q	H	M	M	L	Q	E	G	M	P	P	P	P	P	E	E	E	Q	R
Template Known Secondary structure									.	.	.		S																		T	T								.	.		G	G	G								T							S			G	G	G				T	T	S
Template Predicted Secondary structure									.	.	.																													.	.
Template SS confidence
		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																				120	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	K	H	I	H	A	L	S	K	W	L	Q	E	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	P	H	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	H	K	K
Query Conservation		.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	A	M	T	V	E	M	Q	F	D	A	V	P	G	A	A	E	G	C	A	A	V	V	A	V	G	D	L	A	A	A	T	G	V	R	S	V	A	E	K	L	G	L	P	F	F	Y	S	V	P	S	P	V	Y	L	A	S	P	H	L	P	P	A	Y	D	E	P	T	T	P	G	V	T	D	I	R	V	L	W
Template Known Secondary structure																		T	T	T		S																						T								S	S	G	G	G	S			S	S	S				B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A	E	S	T	I	N	V	I	F	N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	A	A	R	F	A	D	R	Y	G	P	T	L	N	R	R	R	A	E	I	G	L	P	P	V	E	D	V	F	G	Y	G	H	G	E	R	P	L	L	A	A	D	P	V	L	A	P	L	Q	P	D	V	D	A	V	Q	T	G	A	W	L	L	S	D	E	R	P	L	P	P	E	L	E	A	F	L	A	A
Template Known Secondary structure																							T	T					S						T	T		S	S					S		T	T	T	S				S	S																											S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q	A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	S	S	F	E	G	F
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		G	S	P	P	V	H	I	G	F	G	S	S	S	G	R	G	I	A	D	A	A	K	V	A	V	E	A	I	R	A	Q	G	R	R	V	I	L	S	R	G	W	T	E	L	V	L	P	D	D	R	D	D	C	F	A	I	D	E	V	N	F	Q	A	L	F	R	R	V	A	A	V	I	.	.	.	.	H	H	G	S
Template Known Secondary structure		S	S								T	T			S																	T	T								T	T	T	T				S				T	T					S	S							G	G	G	S	S				.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																								.	.	.	.																			.	.
Query SS confidence																								.	.	.	.																			.	.
Query Sequence		P	M	T	L	L	E	A	L	S	W	G	I	P	C	I	S	A	D	C	V	S	G	.	.	.	.	P	A	D	I	I	Q	P	D	V	N	G	H	L	Y	Q	P	G	D	.	.	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	E	K	I	P	A	S	I	D	E	F	Y	Q	S	K
Query Conservation																								.	.	.	.																			.	.
Alig confidence																				.				.	.	.	.																			.	.
Template Conservation																				.
Template Sequence		A	G	T	E	H	V	A	T	R	A	G	V	P	Q	L	V	I	P	.	R	N	T	D	Q	P	Y	F	A	G	R	V	A	A	L	G	I	G	V	A	H	D	G	P	T	P	T	F	E	S	L	S	A	A	L	T	T	V	L	A	P	E	T	R	A	R	A	E	A	V	A	G	M	V	L	T	D	G	A	A	A
Template Known Secondary structure												T								.		S	B	T												T	S					S	S	S															T	S											T	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		343	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	D	R	L	H	K	V	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	D	L	V	L	A	A	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions