Phyre 2 alignment of P27127 with d1o6ca

Job Description P27127
Confidence 99.94% Date Thu Jan 5 11:43:14 GMT 2012

Rank 27 Aligned Residues 331

% Identity 12% Template d1o6ca_

SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDP-N-acetylglucosamine 2-epimerase

Resolution 2.90

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.																.																								.	.	.	.	.
Query SS confidence																		.	.																.																								.	.	.	.	.
Query Sequence	M	K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	.	.	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	.	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	.	.	.	.	.	S	C	S	F	S	N	I	R	L	G	F	L	R	R	A	K	H
Query Conservation																		.	.																.																								.	.	.	.	.
Alig confidence								.	.	.	.	.	.					.	.																.																								.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence	L	K	V	X	T	V	F	.	.	.	.	.	.	G	T	R	P	E	A	I	K	X	A	P	L	V	L	E	L	K	K	Y	P	E	I	D	S	Y	V	T	V	T	A	Q	H	R	Q	X	L	D	Q	V	L	D	A	F	H	I	K	P	D	F	D	L	N	I	X	K	E	R	Q	T	L	A	E	I	T	S	N	A
Template Known Secondary structure								.	.	.	.	.	.		S														G	G	G		T	T										S		G	G	G	T							T	T				S								T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
	4	.	.	.	.	.	10							.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																						.																							.	.	.	.	.	.	.
Query SS confidence																						.																							.	.	.	.	.	.	.
Query Sequence	I	H	A	L	S	K	W	L	Q	E	Y	Q	P	D	I	V	I	C	I	D	V	.	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	.	.	.	.	.	.	.	P	H	F	S	L	D	H	K	K	H	A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q
Query Conservation																						.																							.	.	.	.	.	.	.
Alig confidence																						.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence	L	V	R	L	D	E	L	F	K	D	I	K	P	D	I	V	L	V	H	G	D	T	T	T	T	F	A	G	S	L	A	A	F	Y	H	Q	I	A	V	G	H	V	E	A	G	L	R	T	G	N	K	Y	S	P	F	P	E	E	L	N	R	Q	X	T	G	A	I	A	D	L	H	F	A	P	T	G	Q	A	K	D
Template Known Secondary structure														S						T	T														T	T							S						S		T	T	T	T	T	T													S					S	S
Template Predicted Secondary structure
Template SS confidence
	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

	145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	M	I	N	R	G	V	A	E	S	T	I	N	V	I	F	N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q	A	K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence	N	L	L	K	E	N	K	K	A	D	S	I	F	V	T	G	N	T	A	I	D	A	L	N	T	T	V	R	D	G	Y	S	H	P	V	L	D	Q	V	G	E	D	K	X	I	L	.	.	L	T	X	E	N	X	F	K	A	I	R	R	I	V	G	E	F	E	D	V	Q	V	V	Y	P	P	V	V	R	E	A	A
Template Known Secondary structure					T	T			G	G	G																		S	S				S	T	T	T	T	T	T	T	S					.	.																		T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	S	S	F	E	G	F	P	M	T	L	L	E	A	L	S	W	G	I	P	C	I	S	A	D	C	V	S	G	P	A	D	I	I	Q	P	D	V	N	G	H	L	Y
Query Conservation
Alig confidence					.	.	.	.	.	.																														.	.	.	.	.	.	.																.	.	.											.
Template Conservation					.	.	.	.	.	.																														.	.	.	.	.	.	.																.	.	.											.
Template Sequence	H	K	H	D	.	.	.	.	.	.	S	D	R	V	H	L	I	E	P	L	E	V	I	D	F	H	N	F	A	A	K	S	H	F	I	L	T	D	G	.	.	.	.	.	.	.	V	Q	E	E	A	P	S	L	G	K	P	V	L	V	L	.	.	.	R	D	T	T	E	G	V	E	A	G	.	T	L	K	L	A
Template Known Secondary structure					.	.	.	.	.	.		S	S																				S							.	.	.	.	.	.	.					G	G	G	G	T							.	.	.		S					T	T	T	T	.	S	S
Template Predicted Secondary structure					.	.	.	.	.	.																														.	.	.	.	.	.	.																.	.	.											.
Template SS confidence
	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.								.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.		.	.	310	.	.

	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	P	G	D	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	E	K	I	P	A	S	I	D	E	F	Y	Q	S	K	Y	Y	D	R	L	H	K	V	I	I	S	A	I	S	R	R	K
Query Conservation
Alig confidence			.																			.	.
Template Conservation			.																			.	.
Template Sequence	G	T	.	D	E	E	N	I	Y	Q	L	A	K	Q	L	L	T	D	P	D	E	.	.	Y	K	K	X	S	Q	A	S	N	P	Y	G	D	G	E	A	S	R	R	I	V	E	E	L	L	F	H	Y	G	Y	R	K
Template Known Secondary structure		S	.																			.	.										T	T			S														T	T	S		S
Template Predicted Secondary structure			.																			.	.
Template SS confidence
	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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