Job Description P27127 Confidence 100.00% Date Thu Jan 5 11:43:14 GMT 2012 Rank 20 Aligned Residues 344 % Identity 11% Template c3ot5D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F	L	R	R	A	K	H	I	H	A	L	S	K	W	L
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		I	K	V	M	S	I	F	G	T	R	P	E	A	I	K	.	.	.	.	M	A	P	L	V	L	A	L	E	K	E	P	E	T	F	E	S	T	V	V	I	T	A	M	L	D	Q	V	L	E	I	F	D	I	K	P	D	I	D	L	D	I	G	Q	T	L	A	E	I	T	S	R	V	M	N	G	I	N	E	V	I
Template Known Secondary structure										S							.	.	.	.										T		T	T	T																		T	T				S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		Q	E	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	.	.	.	.	.	.	.	.	P	H	F	S	L	D	H	K	K	H	A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	E	N	P	D	I	V	L	V	H	G	D	T	T	T	S	F	A	A	G	L	A	T	F	Y	Q	Q	K	M	L	G	H	V	E	A	G	L	R	T	W	N	K	Y	S	P	F	P	E	E	M	N	R	Q	L	T	G	V	M	A	D	I	H	F	S	P	T	K	Q	A	K	E	N	L	L	A	E	G	K	D
Template Known Secondary structure							S						T	T														T	T							S						S		T	T	T	T	T	T													S					S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		E	S	T	I	N	V	I	F	N	P	.	.	.	.	.	.	.	.	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q	A	K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	T	I	F	V	T	G	N	T	A	I	D	A	L	K	T	T	V	Q	K	D	Y	H	H	P	I	L	E	N	L	G	D	N	R	L	I	L	M	T	A	H	R	R	E	N	L	G	E	P	M	Q	G	M	F	E	A	V	R	E	I	V	E	S	R	E	D	T	E	L	V	Y	P	M	H	L	N	P	A	V
Template Known Secondary structure		G	G	G											T					S		T	T								S		T	T															S	T																	T	T									S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	S	S	F	E	G	F	P	M	T	L	L	E	A	L	S	W	G	I	P	C	I	S	A	D	C	V	S	G	P	A	D	I	I	Q	P	D	V	N	G	H	L	Y
Query Conservation
Alig confidence																																									.	.	.	.	.																															.
Template Conservation																																									.	.	.	.	.																															.
Template Sequence		R	E	K	A	M	A	I	L	G	G	H	E	R	I	H	L	I	E	P	L	D	A	I	D	F	H	N	F	L	R	K	S	Y	L	V	F	T	D	S	.	.	.	.	.	G	G	V	Q	E	E	A	P	G	M	G	V	P	V	L	V	L	R	D	T	T	E	R	P	E	G	I	E	A	G	.	T	L	K	L	I
Template Known Secondary structure										T	T		T	T																											.	.	.	.	.							G	G	G	G	T								S	S		S							T	T	.	S
Template Predicted Secondary structure																																									.	.	.	.	.																															.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	G	D	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	E	K	I	P	A	S	I	D	E	F	Y	Q	S	K	Y	Y	D	R	L	H	K	V	I	I	S	A	I	S	R
Query Conservation
Alig confidence				.																								.	.
Template Conservation				.																								.	.
Template Sequence		G	T	.	N	K	E	N	L	I	K	E	A	L	D	L	L	D	N	K	E	S	H	D	K	M	A	.	.	Q	A	A	N	P	Y	G	D	G	F	A	A	N	R	I	L	A	A	I	K	S	H	F	E	E
Template Known Secondary structure			S	.																								.	.		S			T	T			S
Template Predicted Secondary structure				.																								.	.
Template SS confidence
		321	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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