Job Description P27127 Confidence 100.00% Date Thu Jan 5 11:43:14 GMT 2012 Rank 9 Aligned Residues 346 % Identity 16% Template c3okaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form) Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	I	A	F	I	G	E	A	V	S	G	.	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F	L	R	R	A	K	H	I	H	A	L	S	K	W	L
Query Conservation													.
Alig confidence													.																																																						.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		K	T	L	V	V	T	N	D	F	P	P	R	I	G	G	I	Q	S	Y	L	R	D	F	I	A	T	Q	D	P	E	S	I	V	V	F	A	S	T	Q	N	A	E	E	A	H	A	Y	D	K	T	L	D	Y	E	V	I	R	W	P	R	S	V	M	L	P	.	.	.	T	P	T	T	A	H	A	M	A	E	I	I
Template Known Secondary structure								S			T	T	S		S												T	S		G	G	G								S										T	T		S	S						S	S	S	S				.	.	.
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		Q	E	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	P	H	F	S	.	.	.	.	.	.	.	L	D	H	K	K	H	A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A	E
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	R	E	I	D	N	V	W	F	G	A	A	A	P	L	A	L	M	A	G	T	A	K	Q	A	G	A	S	K	V	I	A	S	T	H	G	H	E	V	G	W	S	M	L	P	G	S	R	Q	S	L	R	K	I	G	T	E	V	D	V	L	T	Y	I	S	Q	Y	T	L	R	R	F	K	S	A	F	G	S	H
Template Known Secondary structure				T	T		S					S	S		T	T	G	G	G	G							T	T		S								S		S	S	S	T	T			T	T													S					S									T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.
Query Sequence		S	T	I	N	V	I	F	N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	.	.	.	.	.	.	.	.	.	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q	A	K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q
Query Conservation																									.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	F	E	H	L	P	S	G	V	D	V	K	R	F	T	P	A	T	P	E	D	K	S	A	T	R	K	K	L	G	F	T	D	T	T	P	V	I	A	C	N	S	R	L	V	P	R	K	G	Q	D	S	L	I	K	A	M	P	Q	V	I	A	A	R	P	D	A	Q	L	L	I	V	G	S	G	R	Y	E	S
Template Known Secondary structure		S									B		T	T	T	S																T			T	T								S		S	S	G	G	G																	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	.	.	.	.	.	.	.	S	S	F	E	G	F	P	M	T	L	L	E	A	L	S	W	G	I	P	C	I	S	A	D	C	V	S	G	P	A	D	I	I	Q	P
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence												.																												.	.	.	.	.	.	.																									.
Template Conservation												.																																																											.
Template Sequence		T	L	R	R	L	A	T	D	V	S	.	Q	N	V	K	F	L	G	R	L	E	Y	Q	D	M	I	N	T	L	A	A	A	D	I	F	A	M	P	A	R	T	R	G	G	G	L	D	V	E	G	L	G	I	V	Y	L	E	A	Q	A	C	G	V	P	V	I	A	G	T	.	S	G	G	A	P	E	T	V	T	P
Template Known Secondary structure							T	G	G	G	G	.	G	G						S														S									B	G	G	G	T	B				S										T	T							S	.	S	T	T	G	G	G	G			T
Template Predicted Secondary structure												.																																																											.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																	.	.								.
Query SS confidence																																	.	.								.
Query Sequence		D	V	N	G	H	L	Y	Q	P	G	D	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	.	.	E	K	I	P	A	S	I	.	D	E	F	Y	Q	S	K	Y	Y	D	R	L	H	K	V	I	I	S
Query Conservation																																	.	.								.
Alig confidence			.																														.	.								.
Template Conservation			.
Template Sequence		A	.	T	G	L	V	V	E	G	S	D	V	D	K	L	S	E	L	L	I	E	L	L	D	D	P	I	R	R	A	A	M	G	A	A	G	R	A	H	V	E	A	E	W	S	W	E	I	M	G	E	R	L	T	N	I	L	Q	S
Template Known Secondary structure		T	.	T						T	T														T																				T	B														S
Template Predicted Secondary structure			.
Template SS confidence
		321		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions