Job Description P27127 Confidence 99.57% Date Thu Jan 5 11:43:14 GMT 2012 Rank 40 Aligned Residues 326 % Identity 13% Template c3d0qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein calg3; PDBTitle: crystal structure of calg3 from micromonospora echinospora determined2 in space group i222 Resolution 2.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																													.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																													.	.	.
Template Sequence		R	V	L	F	V	S	.	.	.	S	P	G	I	G	H	L	F	P	L	I	Q	L	A	W	G	F	R	T	A	G	H	D	V	L	I	A	V	.	.	.	A	E	H	A	D	R	A	A	A	A	G	L	E	V	V	D	V	A	P	D	Y	S	A	V	K	V	F	E	Q	V	A	K	D	N	P	R	F	A	E	T
Template Known Secondary structure								.	.	.		S	S	T	T	S	S	G	G	G										T	T								.	.	.	S	S							T	T	T						S		T	T															T	T	S	T	T	T
Template Predicted Secondary structure								.	.	.																													.	.	.
Template SS confidence
		0	.	.	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
																					69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	K	H	I	H	A	L	S	K	W	L	Q	E	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	P	H	F	S	L	D	H	K	K	H	A	E	Y	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	T	R	P	A	I	D	L	E	E	W	G	V	Q	I	A	A	V	N	R	P	L	V	D	G	T	X	A	L	V	D	D	Y	R	P	D	L	V	V	Y	E	Q	G	A	T	V	G	L	L	A	A	D	R	A	G	V	P	A	V	Q	R	N	Q	S	A	W	R	T	R	G	X	H	R	S	I	A	S	F	L
Template Known Secondary structure		G	G	G	S			S		G	G	G	G									G	G	G														S						T	T												T									S	S				T	T								T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A	E	S	T	I	N	V	I	F	N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		T	D	L	X	D	K	H	Q	V	S	L	P	E	P	V	A	T	I	E	S	F	P	P	S	L	.	.	.	.	.	L	L	E	A	E	P	E	G	W	F	X	R	W	V	P	Y	G	G	G	A	V	L	G	D	R	L	P	P	V	P	A	R	P	E	V	A	I	T	X	G	T	I	E	L	Q	A	F	G	I	G
Template Known Secondary structure									T							S					S	S		G	G	G	.	.	.	.	.		S	S			T	T																	S	S						S	S																	G	G
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	G	L	S	Q	A	K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q	A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	S	S	F	E	G	F	P	M	T	L	L	E	A	L	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.												.	.	.														.	.	.	.
Template Conservation																																	.	.	.	.	.	.												.	.	.														.	.	.	.
Template Sequence		A	V	E	P	I	I	A	A	A	G	E	V	D	A	D	F	V	L	A	L	G	D	L	D	I	S	P	L	G	T	L	.	.	.	.	.	.	P	R	N	V	R	A	V	G	W	T	P	.	.	.	L	H	T	L	L	R	T	C	T	A	V	V	H	.	.	.	.	H	G	G	G	G	T	V	X	T	A	I	D
Template Known Secondary structure		G	T								T	T	S	S	S							T	T				G	G	G		S		.	.	.	.	.	.		T	T									.	.	.						T	T							.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.												.	.	.														.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure														.	.	.																																								.	.
Query SS confidence														.	.	.																																								.	.
Query Sequence		W	G	I	P	C	I	S	A	D	C	V	S	.	.	.	G	P	A	D	I	I	Q	P	D	V	N	G	H	L	Y	Q	P	G	D	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	.	.	E	K	I	P	A	S	I	D	E	F	Y	Q	S	K	Y	Y	D	R	L	H	K	V	I
Query Conservation														.	.	.																																								.	.
Alig confidence														.	.	.																																								.	.
Template Conservation
Template Sequence		A	G	I	P	Q	L	L	A	P	D	P	R	D	Q	F	Q	H	T	A	R	E	A	V	S	R	R	G	I	G	L	V	S	T	S	D	K	V	D	A	D	L	L	R	R	L	I	G	D	E	S	L	R	T	A	A	R	E	V	R	E	E	X	V	A	L	P	T	P	A	E	T	V	R	R	I	V	E	R	I
Template Known Secondary structure			T									T	T		T	T												T	S						T	T	T																												T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions