Job Description P27127 Confidence 20.07% Date Thu Jan 5 11:43:14 GMT 2012 Rank 338 Aligned Residues 172 % Identity 14% Template c2yyaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of gar synthetase from aquifex aeolicus Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F	L	R	R	A	K	H	I	H	A	L	S	K	W	L
Query Conservation
Alig confidence								.	.	.	.	.								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	L	V	V	.	.	.	.	.	G	N	G	G	R	E	H	.	.	.	A	I	A	W	K	V	A	Q	S	P	L	V	K	E	L	Y	V	A	K	G	N	A	G	I	W	E	I	A	K	R	V	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	T	D	V	E	K	L	A	E	F	A
Template Known Secondary structure								.	.	.	.	.			S					.	.	.							T	T	S	T	T		S						S			T	T	G	G	G	T	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure								.	.	.	.	.								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.						.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	S	W	P	H	F	S	L	D	H	K	K	H	A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A	E	S	T	I	N	V	I	F
Query Conservation
Alig confidence												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	E	G	V	D	F	T	I	V	.	G	P	E	A	P	L	V	E	G	I	V	D	E	F	E	K	R	G	L	K	I	F	G	P	N	K	E	A	A	K	L	E	G	S	K	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	F	M	K	K	Y	G	I	P	T	A	R	Y	E	V	F	T
Template Known Secondary structure					T		S					.		S	S					T	T								T	T					S			T	T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.									T			B							S
Template Predicted Secondary structure												.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.														.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q	A	K	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	E	K	A	K	E	Y	V	E	K	V	G	A	P	I	V	V	K	A	D	G	L	A	A	G	K	G	A	V	V	C	E	T	V	E	K	A	I	E	T	L	D	R	F	L	N	K
Template Known Secondary structure											T	T	T		S	S						S	S		S	T	T								S													T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions