 |
Job Description | P27127 | Confidence | 88.30% | Date | Thu Jan 5 11:43:14 GMT 2012 |
Rank | 76 | Aligned Residues | 44 |
% Identity | 14% | Template | c2x4gA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; |
PDBTitle: crystal structure of pa4631, a nucleoside-diphosphate-sugar2 epimerase from pseudomonas aeruginosa
|
Resolution | 2.65 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | I | A | F | I | G | E | A | V | S | G | F | G | G | M | E | T | V | I | R | D | V | I | T | T | F | R | Q | Q | H | I | Q | S | E | M | F | F | F | C | R | N | D | K | M | D | K | G | W | L | E |
Query Conservation |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | K | Y | A | V | L | . |
. |
. |
. |
. |
. |
. |
G | A | T | G | L | L | G | H | H | A | A | R | A | I | R | A | A | G | H | D | L | V | L | I | H | R | P | S | S | Q | I | Q | R | L | A | Y | L | E |
Template Known Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | . | . | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | S |
| G | G | G | G | G | G | G |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | |
|
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|