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Job DescriptionP27127
Confidence100.00%DateThu Jan 5 11:43:14 GMT 2012
Rank7Aligned Residues356
% Identity17%Templatec2r60A_
PDB info PDB header:transferaseChain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10.........20.........30.........40.........50.........60...
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Query Sequence  MKIAFIGE. . . . . . . . . . . . AVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIR. . . . .
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Template Sequence  KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIP
Template Known Secondary structure 


SS


TT
TTTTSBTTBSTT



BTTBGGG

S
TT
SS
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   64.....70.........80.... .....90.........100.........110.........
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Query Sequence  . . . . . . . . . . LGFLRRAKHIHALSKWLQEYQ. . PDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFS. . . . . . . . . . . .
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Template Sequence  FGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSN
Template Known Secondary structure 
S
SS


GGG
GGGT


S



SS
TT


STT
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   120.........130.........140......... 150.........160.........170.
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Query Sequence  . . . . . . . . . . . LDHKKHAEYITCADYHLAISSGIKQQMINR. . . . . . . . GVAESTINVIFNPVETKDSVIP. . . . . . . . .
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Template Sequence  FKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKI
Template Known Secondary structure  S

SSSTTTSGGGTTT

TT
GGG



B
TTTSSS


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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   172.......180.........190.........200..... ....210.........220.. ......
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Query Sequence  . . . . . . APEEGETATFIYVGRMKFEGQKRVKDLLDGLSQA. . . KGNWKLHVLGDGSDFEK. . . . . . . . . . . . . . CQAYGR
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Template Sequence  TKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIEL
Template Known Secondary structure  S
GGGTTS

S


GGG
T

SS
SBTTTB
TTS
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   248.250.........260.........270.........280.........290.........300.........310.........320.......
 
   229230.........240.........250.. .......260.........270.........280.........290.........300....
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Query Sequence  ELNIDDRIVWYGWQQYPWELVQQD. . . . IEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLY
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Template Sequence  IDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTR. NGGPAEILDGGKYGVLV
Template Known Secondary structure  TT
BTT

STT


S
B


STT

S.SBTGGGTSS
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   328.330.........340.........350.........360.........370.........380......... 390.........400......
 
   305....310.........320........ .330..... ....340.........350.......
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Query Sequence  QPGDIAGFVTLLNKYIAGEIHIEH. . EKIPASI. DEFYQSKYYDRLHKVIISAISR
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Template Sequence  DPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR
Template Known Secondary structure 
TT
S
SB
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   407..410.........420.........430.........440.........450.........460..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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