Job Description P27127 Confidence 99.95% Date Thu Jan 5 11:43:14 GMT 2012 Rank 24 Aligned Residues 313 % Identity 12% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	A	F	I	G	E	A	V	S	G	F	G	G	M	E	T	V	I	R	D	V	I	T	T	F	R	Q	Q	H	I	Q	S	E	M	F	F	F	C	R	N	D	K	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	W	L	E	G	I	K	Y	S	C	S	F	S	N	I	R	L	G	F
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																				.
Template Sequence		C	Y	L	V	L	S	S	H	D	F	R	.	.	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	G	T	.	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F
Template Known Secondary structure								S	S		T	T	.	.		S	S															S		.							S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure													.	.																				.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.															.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		L	R	R	A	K	H	I	H	A	L	S	K	W	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	P	D	I	V	I	C	I	D	V	I	S	C	L	F	A	A	K	A	R	K	K	S	G	I	D	M	P	V	F	.	.	.	.	.	.	.	S	W	P	H	F	S	L	D	H	K	K	H
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	E	S	D	V	I	V	F	E	S	G	I	A	V	A	F	I	E	L	A	K	R	V	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	I	N	V	A	S	Y	I	E	R	E	F
Template Known Secondary structure				S		G	G	G																											S						S	S	G	G	G	G	G									T	T	S							S	S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Y	I	T	C	A	D	Y	H	L	A	I	S	S	G	I	K	Q	Q	M	I	N	R	G	V	A	E	S	T	I	N	V	I	F	N	P	V	E	T	K	D	S	V	I	P	A	P	E	E	G	E	T	A	T	F	I	Y	V	G	R	M	K	F	E	G	Q	K	R	V	K	D	L	L	D	G	L	S	Q	A
Query Conservation
Alig confidence																				.	.	.	.																							.																					.	.
Template Conservation																				.	.	.	.																							.																					.	.
Template Sequence		D	R	V	A	P	T	L	D	V	I	A	L	V	S	P	A	M	A	.	.	.	.	A	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N	L	D	Q	.	L	G	D	P	S	P	Y	A	E	G	I	H	A	V	A	V	G	S	M	L	.	.	F	D	P	E	F	F	V	V	A	S	K	A	F
Template Known Secondary structure					G	G	G		S					S		G	G	G	G	.	.	.	.	G	G		S		S	T	T								B		T	T				.		T		S		S			S	S									T	T	.	.	B
Template Predicted Secondary structure																				.	.	.	.																							.																					.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.								.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		K	G	N	W	K	L	H	V	L	G	D	G	S	D	F	E	K	C	Q	A	Y	G	R	E	L	N	I	D	D	R	I	V	W	Y	G	W	Q	Q	Y	P	W	E	L	V	Q	Q	D	I	E	K	V	S	A	L	L	L	T	S	S	F	E	G	F	.	.	.	.	.	.	.	P	M	T	L	L	E	A	L	S	W
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	Q	V	T	F	H	V	I	G	S	G	M	G	.	.	.	.	.	.	.	.	.	.	R	H	P	G	Y	G	D	N	V	I	V	Y	G	E	M	K	H	A	Q	T	I	G	Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P	V	Y	L	A	D	S	S	M	K	L	L	Q	Y	D	F	F
Template Known Secondary structure		.	T	T							S		S	S		.	.	.	.	.	.	.	.	.	.			T	T			T	T																		T		S						B	S		S		S		T	T														T
Template Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
			246	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	P	C	I	S	A	D	C	V	S	G	P	A	D	I	I	Q	P	D	V	N	G	H	L	Y	Q	P	G	D	I	A	G	F	V	T	L	L	N	K	Y	I	A	G	E	I	H	I	E	H	E	K	I	P	A	S	I	D	E	F	Y	Q	S	K	Y	Y	D	R	L
Query Conservation
Alig confidence										.							.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation										.							.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		G	L	P	A	V	C	P	N	.	A	V	V	G	P	Y	.	.	.	.	.	K	S	R	F	G	Y	T	P	G	N	A	D	S	V	I	A	A	I	T	Q	A	L	E	A	P	R	V	R	Y	R	.	.	.	.	.	.	.	Q	C	L	N	W	S	D	T	T	D	R	V
Template Known Secondary structure		T							G	.	G	G	T		S		.	.	.	.	.	S	S						T	T																					S	.	.	.	.	.	.	.				B
Template Predicted Secondary structure										.							.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.		.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.								.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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