 |
Job Description | P27127 | Confidence | 71.74% | Date | Thu Jan 5 11:43:14 GMT 2012 |
Rank | 121 | Aligned Residues | 92 |
% Identity | 13% | Template | c2jzcA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:udp-n-acetylglucosamine transferase subunit |
PDBTitle: nmr solution structure of alg13: the sugar donor subunit of2 a yeast n-acetylglucosamine transferase. northeast3 structural genomics consortium target yg1
|
Resolution | UNK |
|
 |
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | |
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
C | Q | A | Y | G | R | E | L | N | I | D | D | R | I | V | W | Y | G | W | Q | Q | Y | P | W | E | L | V | Q | Q | D | I | E | K | V | S | A | L | L | L | T | S | S | F | E | G | F | P | M | T | L | L | E | A | L | S | W | G | I | P | C | I | S | A | D | C | V | S | G | P | . |
. |
. |
. |
. |
. |
. |
A | D | I | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |
|
|   | . | . | . | . | . | . | . |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
| . | . | . | . |   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
Template Sequence |   |
C | G | D | T | A | R | Q | Y | V | L | M | N | G | K | L | K | V | I | G | F | D | F | S | T | K | M | Q | S | I | I | R | D | Y | S | D | L | V | I | S | H | . |
. |
. |
. |
A | G | T | G | S | I | L | D | S | L | R | L | N | K | P | L | I | V | C | V | N | D | S | L | M | D | N | H | Q | Q | Q | I | A | D | K | F |
Template Known Secondary structure |   |
T | T |
| S |
|  |  |  |  | S | T | T | T | S | S |  |  |  |  |
|
| S | S | S | S |  |  |  |  |  |  |  |  |
| S |
|  |  |  | S | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |
|
| S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | D | V | N | G | H | L | Y | Q | P | G | D | I | A | G | F | V | T | L | L | N | K | Y |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
V | E | L | G | Y | V | W | S | C | A | P | . |
T | E | T | G | L | I | A | G | L | R | A | S |
Template Known Secondary structure |   |
 |  |  | S |
|
|
|  |  |
| S | . |
| T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|